Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2874 |
Symbol | |
ID | 5710725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3028080 |
End bp | 3028967 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268800 |
Product | putative citrate lyase subunit beta |
Protein accession | YP_001534208 |
Protein GI | 159045414 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCC CCGTCGATCA TCGCGCCCGC CCCTACCGTT CGGTGCTCTA TATTCCCGGA TCGAAAGAGC GCGCGTTGCA CAAGGCGCAA AGCCTGCCGG TCGACGCCAT CATTTTCGAC CTCGAAGACG CCGTCGCGGT GGAGGAAAAG GCCAATGCCC GCCACCTTTT GGCCCGGACG CTGGCCGAGA CCGACTACGG CCCGCGGGCG AAGATCGTGC GCATCAACGG CTTCGACACC GACTGGGGGC AGGCGGATCT CGACGTGATC GCCGCCGCGC GCCCCGAGGC GATCCTGCTG CCCAAGGTGA ACACCGCCGC GGATGTCGAG ACGCTCGCCG ACAGGCTCGA TGCCCGTCCC GAGACCGCCG AGACCACCAT CTGGACCATG ATGGAAACCC CGCTCGGCAT GCTCAACGCA GCGCAGATCG CCGCCGCCCC GCGCATGGCG GGCTTCGTGA TGGGCACCAA CGATCTGGCC AAGGAACTCG ACAGCCGTTT TCGCCCCGAT CGCCTGCCGA TGCTGACCGG GCTCGGCCTG TGCCTTCTGG CCGCGCGGGC CCACGGGCTC GTGGCCGTCG ACGGGGTCTA CAACGCGTTC AAGGATGACG AAGGTCTCGA GGCCGAGTGC GCGCAGGGCC GCGACATGGG GTTCGATGGC AAGACCCTGA TCCACCCCGC CCAGGTGGCC ATTGCCAACG CCGTCTTCGC CCCGTCGGAC TCCGAACTCG CCCTCGCCTC GCGCCAGATC CTCGCCTTCG AGCAGGCCGC GGCACGCGGC CAGGGCGTCG CCGTGGTCGA CGGCAAGATC GTGGAAAATC TGCACGTTGC CACCGCACGG CAACTTCTGG CAAAAGCGGA GGCAATCCAA GCCATAGCCG CGGAGTAA
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Protein sequence | MDRPVDHRAR PYRSVLYIPG SKERALHKAQ SLPVDAIIFD LEDAVAVEEK ANARHLLART LAETDYGPRA KIVRINGFDT DWGQADLDVI AAARPEAILL PKVNTAADVE TLADRLDARP ETAETTIWTM METPLGMLNA AQIAAAPRMA GFVMGTNDLA KELDSRFRPD RLPMLTGLGL CLLAARAHGL VAVDGVYNAF KDDEGLEAEC AQGRDMGFDG KTLIHPAQVA IANAVFAPSD SELALASRQI LAFEQAAARG QGVAVVDGKI VENLHVATAR QLLAKAEAIQ AIAAE
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