| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2829 |
|---|
| Symbol | gshB |
|---|
| ID | 5710680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2985279 |
|---|
| End bp | 2986226 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641268755 |
|---|
| Product | glutathione synthetase |
|---|
| Protein accession | YP_001534163 |
|---|
| Protein GI | 159045369 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR01380] glutathione synthetase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.520333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.703083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA ACGTCGCTTT CCAGATGGAC CCGATCACCG AGGTCGACAT TGCCGCCGAC
AGCTCCTTCC GGCTGGCCGA AGAGGCCCAG TCGCGCGGGC ATTCGCTTTT TGTCTACGGC
CCGGCGGACC TGACCTATGA CCGAGGCGCG CTGAAGGCCA CAGGGCACAG CTGCCGCGTG
CAGCGGGTCG CGGGCCAGCC CGCCATTCTC GGGGCGCGCG AGACGGTCGA TCTGTCCACC
ATGGACGTGG TCTGGCTGCG CCAGGACCCG CCCTTCGACA TGGGCTACAT CACCACGACC
CATCTGCTCG ACATGGTCGG GTCCCAAACG CTGGTGGTCA ATGACCCGTT CTGGGTCCGC
AACGCGCCCG AGAAGCTGCT GGTGCTGCAA TTTCCCGACC TCACCCCGCC CACGATGATC
GCCCGCAATC TCGACGACCT GAAGAAGTTC AAGGCCGAGT TCGGCGATGT AATCCTCAAG
CCGCTCTACG GCAATGGCGG CGCGGGCGTC TTCCGGCTCA CCCCCGAGGA TCGCAACCTC
AACTCCCTGC ATGAGCTGTT CTCGGCGATC AACCGCGAGC CCCTGATCAT GCAGCAGTTC
CTGCCGGACG TGGCCAGGGG CGACAAGCGG ATCATCCTGG TGGACGGCGC GCCCATCGGC
GCCATCAACC GGGTGCCCGC GGCCGGCGAG ACCCGCTCGA ACATGCATGT GGGCGGGCGG
CCGGAGCCCG TGACCCTGAC GGATCGCGAT CGCGAGATCT GCGACCGGAT CGGTCCGTTC
CTGCGCGAGA AGGGCCAGGT ATTTGTCGGC ATCGACGTGA TCGGCCCCTT CCTGACGGAG
ATCAACGTAA CCTCGCCCAC GGGCCTGCAG GAGCTGGAGC GGTTCGACGG CACCAACGGC
GCAGCCCTGA TCTGGGACGC GATCGAGGCC CGCCGGGCCG CCGCCTAG
|
|---|
| Protein sequence | MSLNVAFQMD PITEVDIAAD SSFRLAEEAQ SRGHSLFVYG PADLTYDRGA LKATGHSCRV
QRVAGQPAIL GARETVDLST MDVVWLRQDP PFDMGYITTT HLLDMVGSQT LVVNDPFWVR
NAPEKLLVLQ FPDLTPPTMI ARNLDDLKKF KAEFGDVILK PLYGNGGAGV FRLTPEDRNL
NSLHELFSAI NREPLIMQQF LPDVARGDKR IILVDGAPIG AINRVPAAGE TRSNMHVGGR
PEPVTLTDRD REICDRIGPF LREKGQVFVG IDVIGPFLTE INVTSPTGLQ ELERFDGTNG
AALIWDAIEA RRAAA
|
|---|
| |