Gene Dshi_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2789 
Symbol 
ID5713689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2948196 
End bp2948651 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content75% 
IMG OID641268715 
Producthypothetical protein 
Protein accessionYP_001534123 
Protein GI159045329 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.769709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCT TCGCCCGCCA TATGGACATC GCCCTCGCCG AGGCCCGCGC CGCCGCCGCC 
CGCGGCGAGG TGCCCGTGGG CGCGGTGCTG ATCGACCCCG CGGGGAAGGT GCTGGCGCGC
GCCGGCAACC GCACCCGCGA GCTGTCGGAT CCCACCGCCC ATGCCGAGGT GCTGGCGATC
CGCGCCGCCT GCGCCGCCGC CGGGTCCGAG CGGCTGCCCG GCGCGGTGCT CTACGTCACG
CTGGAGCCGT GTGCGATCTG CGCCGCCACC ATCGCCGCGG CGCGCATCGC CCGGCTGGTC
TATGGTGCCG CGGACCCCAA ATCCGGCGGC GTGGCCCATG GCGCGCGGGT CTTCTCCCAC
CCCCAGAGCC ACCATGTGCC CGAGGTCATC GACGGCATCG CCGCGGCGCA AGCCGAGGCG
CTGCTGAAGG ATTTTTTCGC CGCGCGACGC CCCTGA
 
Protein sequence
MSPFARHMDI ALAEARAAAA RGEVPVGAVL IDPAGKVLAR AGNRTRELSD PTAHAEVLAI 
RAACAAAGSE RLPGAVLYVT LEPCAICAAT IAAARIARLV YGAADPKSGG VAHGARVFSH
PQSHHVPEVI DGIAAAQAEA LLKDFFAARR P