| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2758 |
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| Symbol | |
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| ID | 5713657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2919558 |
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| End bp | 2920268 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268683 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001534092 |
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| Protein GI | 159045298 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00797611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGCCCC TCTCCGCCCT CCCCAAACAC ATGCAGATCA GCGAAGTCCT GATCCGCGAC
ATCACCGCCG GGCGGCTGGC CGAAGGCGCG CGTCTGCCAC CCGAGCGGGA TCTGGCGGTG
CAGATGGGCA CCTCCGTCGG CACCCTGCGC AAGGCGCTGG CGCACCTGAC AGAACAGGGC
CTGCTCCACC GGGTGCAGGG CTCGGGCAAT TACGTGCGCA AGGGCGGCCC GGCGGCGGGG
GTCTATGCCA TGTTCCGGCT CGAACGGCGC TCGGGCGGCG GCCTGCCCCG GGCCGAAATG
CTCGACCGCG CGCTGATGGA CAAGCCCGCC GACCTGCCCG CGTTCGGTCG CGCCCCCGCC
GCCACCCGGT TCCGACGGCT GCGCGCGCTG GACGACCAGC CCGTCGCGGT GGAAGAGATC
TGGCTCGATG CCAGCGCCGG GAGTCTCGCC GAAGGCCCCC TCTCCGAATC GCTCTATCGC
AGCTACACCG CCCGGCTCGG GCTCACGATC CAGCGGGCCG AGGACCGCGT CCGGCTGGCT
CCGTTTCCCG CCTGGACCCC GCCGCAACTG GCCCCCCCCG ACACCATGGC GGGCTTCGTG
GAACGCTTCG CCTGGGCCGG CCCCGGCCCC GCCATCGAAT ATTCGCGCAC CTGGTTCGAC
GGGACGCGCG CCCATTATGT CCAGCGCCTG AGTGAGACCG CATCCCAATG A
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| Protein sequence | MPPLSALPKH MQISEVLIRD ITAGRLAEGA RLPPERDLAV QMGTSVGTLR KALAHLTEQG
LLHRVQGSGN YVRKGGPAAG VYAMFRLERR SGGGLPRAEM LDRALMDKPA DLPAFGRAPA
ATRFRRLRAL DDQPVAVEEI WLDASAGSLA EGPLSESLYR SYTARLGLTI QRAEDRVRLA
PFPAWTPPQL APPDTMAGFV ERFAWAGPGP AIEYSRTWFD GTRAHYVQRL SETASQ
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