| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2756 |
|---|
| Symbol | |
|---|
| ID | 5713655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2917412 |
|---|
| End bp | 2918302 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641268681 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001534090 |
|---|
| Protein GI | 159045296 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4989] Predicted oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0248863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCA CCCAACTCAC CCCCGACCTG AGCCTGAGCC GGATCGTTTA CGGCATGTGG
CGGCTGGACG AGGATGCCGA CACCTCGCCC GCCCATATCC AGGCCAAGAT CGAGGCGTGT
CTGGCCCAGG GCATCACGAC GCTGGACCAG GCGGATATCT ATGGTGGGTA CATGGCCGAA
GAGCTGCTCG GCGCGGCCTT CAAGGCCGCC CCGGACCTGC GGGCCAAGTG CGAGATCGTG
ACGAAATGCG ATATCGTGGC CCCCGTCGGG CGCTATGCCA GTGCAAAGGT GAAGCATTAC
GACACGTCGC GGGCGCATAT CGAGGCCTCG GTCGACCATT CCCTGCGACT GATGAACATC
GAGCGGATCG ACCTGCTGCT GATCCACCGC CCGGACCCGA TGATGGACGC GGGCGAGACC
GGCGCGGCGC TGGACGGGCT CGTGGCCTCG GGCAAGGTCG GCGCGGTGGG CGTGTCCAAT
TTCAAGCTGC ACGACTGGAC GCTTTTGCAG TCGGCGATGG AGACGCCGCT CGTCACCAAC
CAGATCGAGA TCAGCCTGAC CGCCAATGCG GCCTTCACCA ACGGCGATAT CGCCTTCCTG
CAGGAGCGGG GCATCGCGCC CATGGCCTGG TCGCCTTTGG GCGGTGGCAG CCTGATGACC
GGGGATCACG CCGCGGGCAA GGCGCTGGAT GCGGTGGCGC GCGCCCAGGG GGTGGACCGC
GCGGCGGTGG CGGTGGCCTG GCTGCTGGCG CATCCGGCGG GAATTGTGCC GGTGATGGGG
ACGAACAGGC TTGACCGCAT CGCTGCCTTT TCCGATGCGT TGAAAGTGGA GATGGACCGC
GAGACCTGGT TCGCCCTATA CGAGGCGGCC AACGGGGCGG AGGTTCCCTG A
|
|---|
| Protein sequence | MDRTQLTPDL SLSRIVYGMW RLDEDADTSP AHIQAKIEAC LAQGITTLDQ ADIYGGYMAE
ELLGAAFKAA PDLRAKCEIV TKCDIVAPVG RYASAKVKHY DTSRAHIEAS VDHSLRLMNI
ERIDLLLIHR PDPMMDAGET GAALDGLVAS GKVGAVGVSN FKLHDWTLLQ SAMETPLVTN
QIEISLTANA AFTNGDIAFL QERGIAPMAW SPLGGGSLMT GDHAAGKALD AVARAQGVDR
AAVAVAWLLA HPAGIVPVMG TNRLDRIAAF SDALKVEMDR ETWFALYEAA NGAEVP
|
|---|
| |