| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2755 |
|---|
| Symbol | |
|---|
| ID | 5713654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2916877 |
|---|
| End bp | 2917410 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641268680 |
|---|
| Product | flavin reductase domain protein |
|---|
| Protein accession | YP_001534089 |
|---|
| Protein GI | 159045295 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0570474 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATG GAGCAGCCCC GAAGATGACC GATACACCCC GCCTTGCGCC CTTTACCCCC
GGACCGGACA CAGCGCGCGA GTTCCGAAAC GCGATGGGTC GGTTTCCCAC CGGCGTGACC
GTGGTGACCG TGCAGGGGCC GAAGGGGCCG ATGGGGATCA CCGCCAACAG TTTTTCCAGC
GTGTCGATCG ACCCGCCGCT GCTGCTGTGG TGTCCGGCCA AATATTCCAG CCGGTTCGAG
ACGTTCGCGA CAGCGCCCCG CTTTGCCATC CACATCCTCG GGCAGGGCCA GATGGATGTT
GCGCGGGGCT TTGCCCAGAG GGCCGATGCG TTCGAAGGGC TGGCGCTGGA TCCATGCCCG
CATGCGGTGC CGCTCCTGGC CGATTGTTTG GCGCGGTTCG AGTGCAAGAC CGTGCAGACA
CATGATGCGG GCGATCACAT GATCGTGGTC GGCGAGGTGA TCGAGGCAGG CTACCGGGAC
GGTGAGGCGC TGGTCTTCAG CGAGGGCATG TTCGGACGGT TCGTCGGTCA CTGA
|
|---|
| Protein sequence | MADGAAPKMT DTPRLAPFTP GPDTAREFRN AMGRFPTGVT VVTVQGPKGP MGITANSFSS
VSIDPPLLLW CPAKYSSRFE TFATAPRFAI HILGQGQMDV ARGFAQRADA FEGLALDPCP
HAVPLLADCL ARFECKTVQT HDAGDHMIVV GEVIEAGYRD GEALVFSEGM FGRFVGH
|
|---|
| |