| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2744 |
|---|
| Symbol | pyrG |
|---|
| ID | 5713643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2905872 |
|---|
| End bp | 2907515 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641268669 |
|---|
| Product | CTP synthetase |
|---|
| Protein accession | YP_001534078 |
|---|
| Protein GI | 159045284 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
|---|
| TIGRFAM ID | [TIGR00337] CTP synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0124584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCT TTGTATTCAT CACGGGCGGA GTCGTCTCTT CGCTGGGCAA GGGACTGGCC
TCGGCAGCCC TCGGCGCACT CCTTCAGGCC CGCGGCTTCT CGGTCCGCCT GCGCAAGCTC
GACCCCTATC TGAACGTCGA TCCCGGCACC ATGAGCCCGT TCGAGCATGG CGAAGTCTTC
GTCACCGATG ACGGCGCCGA GACCGATCTG GACCTCGGCC ATTACGAGCG CTTCACCGGC
GTGGCCGCGC GCAGGACCGA TTCCGTCAGC TCCGGCCGGA TCTATTCGAA TGTTCTCGAA
AAGGAACGGC GTGGCGACTA CCTCGGCAAG ACGATCCAGG TCATCCCCCA CGTCACCAAC
GAGATCAAGG ACTTCATCTC GATCGGCGAG GACGAGGTCG ATTTCATGCT CTGCGAGATC
GGCGGCACCG TGGGCGACAT CGAAGGGCTG CCCTTCTTCG AGGCGATCCG CCAGTTCGGC
CAGGACAAGC CCCGCGGCCA GTGCATCTTC ATGCACCTCA CCCTGCTGCC CTATATCGCG
GCCTCGGGCG AGTTGAAGAC CAAGCCGACC CAACACTCGG TCAAGGAGTT GCGCTCCATC
GGCATCGCGC CCGATGTGCT GGTCTGCCGC TCCGAGGGAC CGATCCCACA GAAGGAGCGC
GACAAGCTTG CACTCTTCTG CAACGTCCGG CCCGAAAGCG TGATCGCTGC GCAGGACCTC
AAATCGATCT ACGAAGCCCC CCTCGCCTAT CACCGCGAAG GCCTGGACCA GGCCGTGCTC
GACGCCTTCA GCATCTCGCC CGCGCCCAAG CCCGACCTGA CGGTCTGGCA CGACGTGGCC
GACCGGATCC ACAACCCCGA AGGCGAAGTG AACGTCGCCA TCGTCGGGAA GTATACCCAG
CTCGAGGATG CCTATAAATC CATTGCCGAG GCGCTGACCC ATGGCGGCAT GGCCAACCGG
GTGAAGGTGA AATCCGAATG GATCGACGCC GAGATATTCG AGCGCGAGGA CCCGGTCCCG
CATCTGGAAA AGTTCGACGC GATCCTCGTG CCCGGCGGTT TTGGCGAACG GGGCACCGAG
GGCAAGATCA AGGCCGCCCA ATTCGCACGC GAGCACAAGA TCCCCTACCT CGGCATCTGC
CTCGGCATGC AGATGGCGGT GATCGAAAGC GCCCGGCACC TGACGGACCT GACCGATGCT
GGCTCGGAGG AATTCGACCA CGAGGCGGGC AAGCGCCGCT TCACCCCGGT GGTCTATCAC
CTCAAGGAAT GGGTGCAGGG CAACCACAAG GTCGAACGCA AGGTCGATGA CGACAAGGGC
GGCACCATGC GGCTCGGGGC CTATACCGCG AAGCTGGTCG AGGGTTCGAA AGTCGCGCAG
ATCTATGGCA GCACCACCAT CGAGGAACGG CACCGCCATC GCTACGAGGT CGATATCCAG
TATCGCGACC AGTTGCAGGC CGAGGGGCTG ATCTTCTCGG GCATGTCCCC GGACGGGCGT
TTGCCCGAGA TCGTCGAGGT CAAGGATCAC CCCTGGTTCA TCGGCGTGCA ATTCCACCCG
GAGCTGAAAT CCAAACCCTT CGCGCCGCAC CCGCTCTTTG CCGATTTCGT GCGCGCCGCC
AAGGAGGTCA GCCGGTTGGT CTGA
|
|---|
| Protein sequence | MARFVFITGG VVSSLGKGLA SAALGALLQA RGFSVRLRKL DPYLNVDPGT MSPFEHGEVF
VTDDGAETDL DLGHYERFTG VAARRTDSVS SGRIYSNVLE KERRGDYLGK TIQVIPHVTN
EIKDFISIGE DEVDFMLCEI GGTVGDIEGL PFFEAIRQFG QDKPRGQCIF MHLTLLPYIA
ASGELKTKPT QHSVKELRSI GIAPDVLVCR SEGPIPQKER DKLALFCNVR PESVIAAQDL
KSIYEAPLAY HREGLDQAVL DAFSISPAPK PDLTVWHDVA DRIHNPEGEV NVAIVGKYTQ
LEDAYKSIAE ALTHGGMANR VKVKSEWIDA EIFEREDPVP HLEKFDAILV PGGFGERGTE
GKIKAAQFAR EHKIPYLGIC LGMQMAVIES ARHLTDLTDA GSEEFDHEAG KRRFTPVVYH
LKEWVQGNHK VERKVDDDKG GTMRLGAYTA KLVEGSKVAQ IYGSTTIEER HRHRYEVDIQ
YRDQLQAEGL IFSGMSPDGR LPEIVEVKDH PWFIGVQFHP ELKSKPFAPH PLFADFVRAA
KEVSRLV
|
|---|
| |