Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2720 |
Symbol | |
ID | 5713619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2881448 |
End bp | 2882575 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641268645 |
Product | putative endonuclease/exonuclease/phosphatase |
Protein accession | YP_001534054 |
Protein GI | 159045260 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.389489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGT TCCGCCTTTG CACCTTCAAC ATCGAAAACC TGTTCACCCG GTTCAATTTT TCGGGCTTTT CCGACCCGGA TGCGGCGCGC TACCTGTCGC CGATCGTGCA GTTCTACGGC GATTACGGGG ATGATGACCT GAGCAAGTTC GCCGCGTTCA AGCGCATGGT GGAAACCGCC GCCATCGCGC AGGACGACGA CAAACGTCAG CAGACCGCCC TCGCCATCGC CGAAGCGGAT GCGCATCTCT ACTGCCTGCA GGAGGTTGAC GGGTTCGACC CGCTGACCCG GTTCCTGGAG GCTTATGTGA AGAAGACGAT GGGCGAGAGT TTCCACAACC GCGTCCTGCA CGAAGGCAAC GACCCGCGCG GCATCGACGT GGCCGCGATC TCGGTGCGCA GGTTTCCGTT CTACAGCCGC AGCCATGCCT GGCTGACGGG CTCGGTGATC GACAATACCG AAACGGGACG GGCCCTGCTC GACGCCTATC CTCTGGCGAG GGGCCGCGCG CGGTCGCTGC GCTCGGCGCG GGTGTTTCGG CGCGATTGTC TGGAACTGGT GGTGCCCGTG GGGGACGGGA CGCTCACGCT CTACAACTGT CATTTCAAAT CCATGGGCGG GCGCGATGCG GAGAAATCCC TCGCCACGCG GCAGACCGAA GCGATCCTGG TGCGCGAGCT GATCACCCGG AAATTCCCGG ATCCCGCGGC AGGGCTCTGG GCGATCTGCG GCGATCTGAA CGACGCATTG AGCTACCGCT TCGTCAGCTC GGTGCGGCAG GCCGATGGCA GCTTTGCCGA AAGCCTACGC GACAGGCCGC CTTCCGGCGA AGACGCATCG GGGGTCGCGC CGCTGCTGGA GGATGGGTTC GGGATCAACC TTGTGGCGGC CCTGCCCGAG GCCGCGCGCT GGACCCATTA CTACGCCGGG GGGCGGTCGA AGACCCAGCT TGACTATGTC ATCGCCTCGC CCGCCCTGGC CGCACGGGTG CGCAGCACCC CCGAGATCAT CCGGACGGGC ATGCCCCAGC GCGTGCCCAA CCTCGATACC CCGCGTTACC CCCGGATCGG ATGGGACCGG CCCAAGGCCA GCGACCATTG CCCGGTCGTC GTGGAATTCG ACATCTGA
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Protein sequence | MTKFRLCTFN IENLFTRFNF SGFSDPDAAR YLSPIVQFYG DYGDDDLSKF AAFKRMVETA AIAQDDDKRQ QTALAIAEAD AHLYCLQEVD GFDPLTRFLE AYVKKTMGES FHNRVLHEGN DPRGIDVAAI SVRRFPFYSR SHAWLTGSVI DNTETGRALL DAYPLARGRA RSLRSARVFR RDCLELVVPV GDGTLTLYNC HFKSMGGRDA EKSLATRQTE AILVRELITR KFPDPAAGLW AICGDLNDAL SYRFVSSVRQ ADGSFAESLR DRPPSGEDAS GVAPLLEDGF GINLVAALPE AARWTHYYAG GRSKTQLDYV IASPALAARV RSTPEIIRTG MPQRVPNLDT PRYPRIGWDR PKASDHCPVV VEFDI
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