Gene Dshi_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2720 
Symbol 
ID5713619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2881448 
End bp2882575 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content65% 
IMG OID641268645 
Productputative endonuclease/exonuclease/phosphatase 
Protein accessionYP_001534054 
Protein GI159045260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.389489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT TCCGCCTTTG CACCTTCAAC ATCGAAAACC TGTTCACCCG GTTCAATTTT 
TCGGGCTTTT CCGACCCGGA TGCGGCGCGC TACCTGTCGC CGATCGTGCA GTTCTACGGC
GATTACGGGG ATGATGACCT GAGCAAGTTC GCCGCGTTCA AGCGCATGGT GGAAACCGCC
GCCATCGCGC AGGACGACGA CAAACGTCAG CAGACCGCCC TCGCCATCGC CGAAGCGGAT
GCGCATCTCT ACTGCCTGCA GGAGGTTGAC GGGTTCGACC CGCTGACCCG GTTCCTGGAG
GCTTATGTGA AGAAGACGAT GGGCGAGAGT TTCCACAACC GCGTCCTGCA CGAAGGCAAC
GACCCGCGCG GCATCGACGT GGCCGCGATC TCGGTGCGCA GGTTTCCGTT CTACAGCCGC
AGCCATGCCT GGCTGACGGG CTCGGTGATC GACAATACCG AAACGGGACG GGCCCTGCTC
GACGCCTATC CTCTGGCGAG GGGCCGCGCG CGGTCGCTGC GCTCGGCGCG GGTGTTTCGG
CGCGATTGTC TGGAACTGGT GGTGCCCGTG GGGGACGGGA CGCTCACGCT CTACAACTGT
CATTTCAAAT CCATGGGCGG GCGCGATGCG GAGAAATCCC TCGCCACGCG GCAGACCGAA
GCGATCCTGG TGCGCGAGCT GATCACCCGG AAATTCCCGG ATCCCGCGGC AGGGCTCTGG
GCGATCTGCG GCGATCTGAA CGACGCATTG AGCTACCGCT TCGTCAGCTC GGTGCGGCAG
GCCGATGGCA GCTTTGCCGA AAGCCTACGC GACAGGCCGC CTTCCGGCGA AGACGCATCG
GGGGTCGCGC CGCTGCTGGA GGATGGGTTC GGGATCAACC TTGTGGCGGC CCTGCCCGAG
GCCGCGCGCT GGACCCATTA CTACGCCGGG GGGCGGTCGA AGACCCAGCT TGACTATGTC
ATCGCCTCGC CCGCCCTGGC CGCACGGGTG CGCAGCACCC CCGAGATCAT CCGGACGGGC
ATGCCCCAGC GCGTGCCCAA CCTCGATACC CCGCGTTACC CCCGGATCGG ATGGGACCGG
CCCAAGGCCA GCGACCATTG CCCGGTCGTC GTGGAATTCG ACATCTGA
 
Protein sequence
MTKFRLCTFN IENLFTRFNF SGFSDPDAAR YLSPIVQFYG DYGDDDLSKF AAFKRMVETA 
AIAQDDDKRQ QTALAIAEAD AHLYCLQEVD GFDPLTRFLE AYVKKTMGES FHNRVLHEGN
DPRGIDVAAI SVRRFPFYSR SHAWLTGSVI DNTETGRALL DAYPLARGRA RSLRSARVFR
RDCLELVVPV GDGTLTLYNC HFKSMGGRDA EKSLATRQTE AILVRELITR KFPDPAAGLW
AICGDLNDAL SYRFVSSVRQ ADGSFAESLR DRPPSGEDAS GVAPLLEDGF GINLVAALPE
AARWTHYYAG GRSKTQLDYV IASPALAARV RSTPEIIRTG MPQRVPNLDT PRYPRIGWDR
PKASDHCPVV VEFDI