Gene Dshi_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2686 
Symbol 
ID5713584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2846962 
End bp2847378 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content67% 
IMG OID641268610 
Productuniversal stress protein 
Protein accessionYP_001534020 
Protein GI159045226 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0810478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACAC GCATTCTGGT CCCCGTGGAC CTCGACAACG CCGACAAGCT GACAAAGGCG 
CTCGATCTGG CCGGACAGAC CGCCAAGGCC CACGGGGCCG AGGTGATCTA TGTCGACGTG
GTCGACGCCG TGCCCACGAC CTCGACCCGC ACCGAAGGGC AGAAAGCCGG CGCGCGGCTC
GCGCAATTCG CCGCCGACCA GGGTCTGGCC CATGACATCA AGACCCGCGG CCATGTCACC
CTGCGCGGCG ATCTGAGCCT GAACGTGGGC GCGGACATCC TCAAGGCCGC CCGCGATACC
CAGGCCGACC TGATCGTCAT GGGCACTCAC ATGCCCGGCC TGAAGGAGTA TTTCCTGTCC
TCCAACGCCG GCTACGTCGC CACCCACGCC CCGATCACGG TGACCGTGGT GCGCTGA
 
Protein sequence
MYTRILVPVD LDNADKLTKA LDLAGQTAKA HGAEVIYVDV VDAVPTTSTR TEGQKAGARL 
AQFAADQGLA HDIKTRGHVT LRGDLSLNVG ADILKAARDT QADLIVMGTH MPGLKEYFLS
SNAGYVATHA PITVTVVR