Gene Dshi_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2683 
Symbolmro 
ID5713581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2843824 
End bp2844828 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content70% 
IMG OID641268607 
Productaldose 1-epimerase 
Protein accessionYP_001534017 
Protein GI159045223 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.33869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG AAATCACCCC GTTCGGGAAG ACCGCCCAAG GCACGCAGGT CCACGCGATC 
ACCCTCGCCA GCGACGCGTT GCGGGTGACG CTGCTGACCT GGGGCGCGGT GATCCAGGAT
GTGCGCCTGA CCGGGGTGGC GCAGCCGCTG ACCCTCGGGA CCGCGGATCT GGCCGCCTAT
GCCGGGGCGA TGAACAGCTT CGGCGCGCTG ATGGGGCCGG TTGTGAACCG GATCAAGGGG
GCCGCCGCCC CGATCGCGGG CCAGCGCCAC GCCTTCGAGG CCAATCTCGA CGGCGCCCAT
ACCAAGCATG GCGGCAGCCA CGGGCCGCAA TACCGGGTCT GGCACCTGCT GGAGAGCAGC
CCGACCCATG CCCTGCTGGA GACGGTGCTG CAGGACGGGC TGTCGGGCTT TCCCGGCAAC
CGCACCCTGC GCGCCGAGTA CCGGGTGAAC GGCGCCGATC TGGACCTGGT GGTGATCGGC
ACCACGGACG CCCCGACCCT GATGAACATC GCCAATCACA GCTACTGGAA CCTCGACGGC
TCCGACAGCA TCGCGGGCCA TACGCTGCAG ATCGCCGCGG ACAGGGTGAC GGTGAACGGC
GACGACCTGA TGGTCACGGG CGAGGTCATG GCGGTGGCGG GCACCCGGTT CGACTTCCGC
AGGCCCCGCG CGTTCGACCC GGGCCCCGAG AACCGGTTCG ACCTGAATTA CGTGCTGGCC
GATGCCAAGC GGCCCCTGAG CCATGCCTGC ACCCTGACCG GCACCTCCGG CGTGCAGATG
GAGATGTCCA CCACCGAGCC GGGGTTGCAG GTCTTCGATC TGGGCACCTT CACCACCGCG
CCCCATCCGG GCCATGCGGG CACGCCCTAT CCGCGCTTCG CGGCCATCGC GCTCGAGGCG
CAGGGCTGGC CCGACGCGGC GAACCATGCG GGCTTCCCGC CGATCGAGAT CGGCCCCGAT
CACCCCTATC ACCAGCACAC GCGCTGGCGG TTCCGCCGCC CCTGA
 
Protein sequence
MSAEITPFGK TAQGTQVHAI TLASDALRVT LLTWGAVIQD VRLTGVAQPL TLGTADLAAY 
AGAMNSFGAL MGPVVNRIKG AAAPIAGQRH AFEANLDGAH TKHGGSHGPQ YRVWHLLESS
PTHALLETVL QDGLSGFPGN RTLRAEYRVN GADLDLVVIG TTDAPTLMNI ANHSYWNLDG
SDSIAGHTLQ IAADRVTVNG DDLMVTGEVM AVAGTRFDFR RPRAFDPGPE NRFDLNYVLA
DAKRPLSHAC TLTGTSGVQM EMSTTEPGLQ VFDLGTFTTA PHPGHAGTPY PRFAAIALEA
QGWPDAANHA GFPPIEIGPD HPYHQHTRWR FRRP