Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2667 |
Symbol | |
ID | 5713565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2823667 |
End bp | 2824386 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641268591 |
Product | ABC transporter |
Protein accession | YP_001534001 |
Protein GI | 159045207 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.075945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGGCC TGTCCGTCCG CAACCTGAGC TTCTCCTACG GCTCCAGGCG CGCCCTGTCG GATGTCAGCT TCGACATCCC GCAAGGCGCG TTCTGCGCCT TGCTCGGCCC CAATGGCGCG GGCAAGTCCA CGCTCTTCGG GCTGCTCACC CGGCTTTTCA CCAGCCCCGA AGGCACCATC ACCGTGGCCG GGCATGAGCT GCGCAAGACG CCCCGCGCGG CCCTTGCCGA GATCGGCGTG GTGTTCCAGC AATCCACCCT GGACGTGTCG CTCTCGGTGG AGCGGAACCT GAAATACTTC GCCGCCCTGC ACGGGCTGGC CGGGGCCGAG GCCGCCCGCC GGATCGACGC CGCGCTCGAC CGGCTCGACA TGGCCGAGCG GCGGCGGGAG ACCGTGCGCG ACCTCAATGG CGGCCACCGC CGCCGGACCG AGATCGCCCG CGCCCTGATC CATTCACCCT CGGTGCTGCT GCTCGACGAG CCGACCGTGG GGCTCGATGC GGCCTCCCGC GCCGCGATCA CCGCCCATGT CCACGATCTG GCCGCGGAGA CCGGGCTGAC CGTGCTCTGG GCCACCCACC TCACGGACGA GATCCGCGAT ACCGACCAGC TGCTGATCCT GCACAAGGGC GAGATCCGCG CCGACGGGAC CGCCGCCGAG ATCCGCGGCA ACACCCCGCT CACCGAGCAT TTCCTCCGCG TCACGGCGCA GCCCGCATGA
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Protein sequence | MTGLSVRNLS FSYGSRRALS DVSFDIPQGA FCALLGPNGA GKSTLFGLLT RLFTSPEGTI TVAGHELRKT PRAALAEIGV VFQQSTLDVS LSVERNLKYF AALHGLAGAE AARRIDAALD RLDMAERRRE TVRDLNGGHR RRTEIARALI HSPSVLLLDE PTVGLDAASR AAITAHVHDL AAETGLTVLW ATHLTDEIRD TDQLLILHKG EIRADGTAAE IRGNTPLTEH FLRVTAQPA
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