Gene Dshi_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2644 
Symbol 
ID5713542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2801317 
End bp2801655 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content66% 
IMG OID641268568 
Productputative export-related chaperone 
Protein accessionYP_001533978 
Protein GI159045184 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain
[TIGR02222] export-related chaperone CsaA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.857734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA TCACGTTCGA CGATTTCCTC AAGGTGGACA TCCGCGTGGG CCGCGTGGTG 
CAGGCGGAGC CGTTCCCGGA GGCGCGCAAG CCCGCGATCA AGCTCTGGGT GGATTTCGGT
GGCGCGCTGG GCGTCAGGAA AAGCTCGGCC CAGATCACCC GGCATTACGC CCCAGAGGCG
CTGATCGGCA CGCAGGTGAT GGCGGTGGTG AATTTCCCGC CGCGCCAGAT CGGCAAGTTC
ATGTCCGAGA TCCTCGTGCT CGGGGTGCCG GATACAGACG GGGAGGTGGT GCTGCTGCGC
CCGGATCTCG ACGTTCCGCT GGGAGGGCGG CTTTACTGA
 
Protein sequence
MAEITFDDFL KVDIRVGRVV QAEPFPEARK PAIKLWVDFG GALGVRKSSA QITRHYAPEA 
LIGTQVMAVV NFPPRQIGKF MSEILVLGVP DTDGEVVLLR PDLDVPLGGR LY