Gene Dshi_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2642 
Symbol 
ID5713540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2799448 
End bp2800284 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID641268566 
Producthypothetical protein 
Protein accessionYP_001533976 
Protein GI159045182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.52745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGGA CGACAGCGGT CGCAATTTAC GGCGAGATGC GGTTGCCGGT ATTCTCGCTG 
GGCACGACGG TTCTTCTGCT GGCCCTGACC TTGCCGGCAG CGGCGGTCAC CGGGTTTCTC
TTCGGCCAAC GGCAGCGTGC CCGGACCCTC GCCAAGGGCA AGATCATCGA CAAGGTGCTG
GGCGAGACAA CGCTGGGCGC GATCCTCGGC CTGCTCGGGC TGCTGCTGGC GTTCAGCTTC
GGCCATGCCC TGTCGCTCGC CCAGACCCGC AAGGTCGCGG TGATCGACGA GGCGGCGGCG
CTCGGCACGG TCTTTCTGCG CGCCGATTAC GCGGGCGAGG GCGCGCGCAC CGACCTCAAG
ACCGCGATTT ACGACTATAC CCTGACACGG GTCGTGCCCG ATGTGGCCCG GGTCGAAAGC
GAGGCGGATG TCCGGGCGTT CCTGGAAACG AGTCTCGCGG CTCAGGCCAA ACTCTGGCCC
GCGACCTTGG CGGCAACCGA CGGTGTGGAG CCGCCGGTCG CGACCTTCAT CGCCTCGGCC
ATGAACGACG CGATCGATGC CCATCTCTAC CGGATGCAGA CCTTCGCGGT GCCGGTCTCG
GACGTGACGC AGCTGATGCT GCTGGCAACG GCCTTGGCAT CGCTGTTCCT GCTGGGCAAC
CGGGCGGGCA TGCAGGGACG CGTGCTGTCC TGGCGCACCT TCATGTTCTC GGGCTTCCTG
TTCGTGGTGA TGGTCACAAT CGTGGATGTG CAGCGCAGCT CGGCCGGGTT CGTCCAGACC
GACCAGTCGC CCCTGTTGGT GACGATCTTC GATATGGAGC AGGCGCTGCG CCTCTAA
 
Protein sequence
MDGTTAVAIY GEMRLPVFSL GTTVLLLALT LPAAAVTGFL FGQRQRARTL AKGKIIDKVL 
GETTLGAILG LLGLLLAFSF GHALSLAQTR KVAVIDEAAA LGTVFLRADY AGEGARTDLK
TAIYDYTLTR VVPDVARVES EADVRAFLET SLAAQAKLWP ATLAATDGVE PPVATFIASA
MNDAIDAHLY RMQTFAVPVS DVTQLMLLAT ALASLFLLGN RAGMQGRVLS WRTFMFSGFL
FVVMVTIVDV QRSSAGFVQT DQSPLLVTIF DMEQALRL