| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2623 |
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| Symbol | |
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| ID | 5713521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2782469 |
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| End bp | 2783221 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268547 |
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| Product | peptidase M48 |
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| Protein accession | YP_001533957 |
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| Protein GI | 159045163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0128988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTGC AATACGTCTC CCTCGCCCGC GTGGCCCTCG CAGGCGCTCT GGCCGCCGCC
CTGGCGGGGT GCAGCGTCGC GCCCGCGCCG CAACAGGCAA GCCGCCCCGT CCCGTCGGCG
CCCGAACCGG TCGCGCGACT GTCCTCCGAT CAGGCGGTGC GCAATTTCGA TGCGGTGGTC
CGGCGGGTGG AGCCCGTGGC GGAATCCGAA TGCCGCGCGC GCACCCGCGG GCTGGATTGC
GACTTCCTGA TCCAGGTGGA TACCCGGCCG GGCCAGCCTG TGAACGCCTT TCACACCCTC
GATGCCGAAG GGCGCCCGCT GATCGTGTTC ACCGTCGCCA TGATCGCCGA GGCGCGCAAC
CAGGACGAGC TGGCCTTCGT CATGGGACAC GAGGCGGCCC ACCATATCGC CGGCCACCTG
GTCCAGACCC AGCGCAACGC GGGCCTTGGC GCGGTCGTTT TCGGCACGCT CGCCTCCCTC
GCCACTTCGG GGGCCAGCGA CGCGGTCCGG CAGGCCACGG TGGAACAAGC GCTTCAGGCC
GGTGCCCTTG TCGGGGCGCG GACCTACAGC AAGGAAAACG AGCTGGAGGC GGACGCGCTG
GGCACGGTCA TCGCCGCCCG CGCGGGATTC GACCCCCTGC GCGGGGCGCT GTTCTTCTCG
CGCCTGCCCG ATCCCGGTGA TCAATTCCTG GGCAGTCATC CCCCGAATGC GGCACGTTTT
GAAACCGTAA GGCAGGTCGC CGCCACGCTT TGA
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| Protein sequence | MVLQYVSLAR VALAGALAAA LAGCSVAPAP QQASRPVPSA PEPVARLSSD QAVRNFDAVV
RRVEPVAESE CRARTRGLDC DFLIQVDTRP GQPVNAFHTL DAEGRPLIVF TVAMIAEARN
QDELAFVMGH EAAHHIAGHL VQTQRNAGLG AVVFGTLASL ATSGASDAVR QATVEQALQA
GALVGARTYS KENELEADAL GTVIAARAGF DPLRGALFFS RLPDPGDQFL GSHPPNAARF
ETVRQVAATL
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