| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2601 |
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| Symbol | |
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| ID | 5713499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2765180 |
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| End bp | 2766208 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641268525 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001533935 |
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| Protein GI | 159045141 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0251856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCTG AGAGCACGCC ACAACTGTCA ACAGTTTCCA GTCAGTTCAT TGCGGACTGG
CTGCAGGCGC TGCGACCCCT GTGCAGCGTG GATCATTTTC GATCTCTCCT GAAACGCGCC
GCACTTCAAG ACGATTGCGA CGCCCCGACC GGCAGGGTGA CGCTTGATCA AGTTGTTTGT
CTCTATCAAC TGGCAGCTGT CGAGACCGAG GATGAGATGA TGGGCCTTTG GTCCCGCCCC
ATCCGCCAAC GCGCACTGCA ACACTTGCTG ACGTCGATCC GCGAAGCGAC AACCCTTTCC
TCAGCACTCT ACCGGTTCTC GACTTTCTGG AACCTGCTGC TTGATGATTA CCAATTCTCG
TTTGCGGAAG CGGATAATGT GTCGGTGTTG AAGCTTGTGC CGCAGACCGA TCAAGCCGCT
CAGCGGTTCG GCCACATGCT GATCCTAAAA CTGGCACATG GACTGATTTC CTGGCTGGCC
CGATATGAAG TCCCCGTCAA AGCGGTGGGT TTCGCCTTCG AGGCGCCAGC CTTCGAGGAA
GACTACGCAG TGATCTTTCC TGCGCCCGTG CGGTTCGCTC AGTCGGCGAC GTCGATTGCA
TTTGGTCCTG GCGTCTTGGG TCCGGTTCAG GTGCGCAGTT CGGCAGACTT GACTCTGTTT
TTGGAAAACG CGCCCCGGGA TTGGATATTT ACCCAGTCCC AAGTGCATAC CCAGTCCTTG
CGGGTCCGCA CCTATCTGAG CCAGACGGGT TGGGACAGTG CAAACCTGAC AGAGGCCGCG
GCCGCGATGC ACGTGACCCC GCGCACACTC ATCCGCAAGT TGGAGGCCGA CGGCACATCG
TTTCAGGCCA TCAAGGACGC CTTACGTCGC GACATTGCGA TCCGTCATCT GCAAACAGGG
CAGCATAGTG TCGAAGCCAT CGCCCATGAG GTGGGGTTTT CGTCGGCGGC TAACTTCCAC
AAAGCGTTTC AAAGGTGGAC TGGCAATACA CCCAGCTCAT ATCGACGCAA GCCTTACTCC
GGCGTGTAA
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| Protein sequence | MPPESTPQLS TVSSQFIADW LQALRPLCSV DHFRSLLKRA ALQDDCDAPT GRVTLDQVVC
LYQLAAVETE DEMMGLWSRP IRQRALQHLL TSIREATTLS SALYRFSTFW NLLLDDYQFS
FAEADNVSVL KLVPQTDQAA QRFGHMLILK LAHGLISWLA RYEVPVKAVG FAFEAPAFEE
DYAVIFPAPV RFAQSATSIA FGPGVLGPVQ VRSSADLTLF LENAPRDWIF TQSQVHTQSL
RVRTYLSQTG WDSANLTEAA AAMHVTPRTL IRKLEADGTS FQAIKDALRR DIAIRHLQTG
QHSVEAIAHE VGFSSAANFH KAFQRWTGNT PSSYRRKPYS GV
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