| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2600 |
|---|
| Symbol | |
|---|
| ID | 5713498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2764294 |
|---|
| End bp | 2765190 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641268524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533934 |
|---|
| Protein GI | 159045140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0233852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAAGGC CTGACAATCC ATCTCTTGGG ATCGCATTGC GCATCCTGTC AGGGGTCCTG
TTTACCGGCA TGGTCGTCTG CGTGAAGGCC CTAAGCGACG CCGCTCCGCT TGGTCAGATC
GTTTTCTTCC GATCCTTCTT TGCGCTTATT CCACTCGTGA TTTTCCTGAT GGTGCGCCAT
GAATTTCCTG GCGGTCTTCG CACCAAACGC CCCATCGGTC ATCTGGTGCG GTCGTTTTTC
GGGGCGGCAG CGATGTTCAC CTCGTTCGCC TCAGTAGCGC TTCTGCCGTT GGCCGAGGCG
GTCCTGCTCG CCCAACTCGC GCCAGTGCTG ACCGCAATCA CAGCCGTTGT GGTTCTGTCA
GAACGGCTCA CGAAATGGCG TGTGATTGGG CTCGCTTTCG GGCTGGCAGG TGTTCTGGTC
CTGGTCTGGC CCGACATTGG AGGCGGCACT GTCGATACGC AGCGGTTCCT CGGGATCGGT
CTTGGACTAT TGACTGCACT TCTGACCGCC TTCGCGCTGA TCATGGTGCG CAGCTTGACA
CGGACCGAGA GCCCCGGGGC CATCGCCTTC TACTTCGTGG TCGCGTCTAT GGCCGGTGGA
ATACTGACGC TGCCATGGGG CTGGGCATTC CCTGACTCGC AAACGCTCAT GTTGCTGATA
CTTGCAGGCC TCTTCGGTGG GTTCGCGCAT ATCGCGATGA CACTCTCGTT CAGCTATACC
GAGGCCTCCC GTCTAGCGCC GTTCGAATAT GTCGCGCTTC TTTGGCCGGT TCTAGCGGAT
TTGCTGATCT TCAAATTACC CCTGTCCGGC AGCTTTCTAC TCGCGATGCC TCTTGTCTTA
GCCGGTGCTG CCGTTGCAGC GTTGGAAGGC AAAAGAAGAA CTCGGAATGC CGCCTGA
|
|---|
| Protein sequence | MTRPDNPSLG IALRILSGVL FTGMVVCVKA LSDAAPLGQI VFFRSFFALI PLVIFLMVRH
EFPGGLRTKR PIGHLVRSFF GAAAMFTSFA SVALLPLAEA VLLAQLAPVL TAITAVVVLS
ERLTKWRVIG LAFGLAGVLV LVWPDIGGGT VDTQRFLGIG LGLLTALLTA FALIMVRSLT
RTESPGAIAF YFVVASMAGG ILTLPWGWAF PDSQTLMLLI LAGLFGGFAH IAMTLSFSYT
EASRLAPFEY VALLWPVLAD LLIFKLPLSG SFLLAMPLVL AGAAVAALEG KRRTRNAA
|
|---|
| |