Gene Dshi_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2585 
Symbol 
ID5713483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2750951 
End bp2751463 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content68% 
IMG OID641268509 
Producthypothetical protein 
Protein accessionYP_001533919 
Protein GI159045125 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000482687 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTTCA AAGCTTTCGC TCTTGCCGCA GGCCTCGGCC TCGCGGCCCT GCCCGCCCTC 
GCCATGGACG GCCCCATCAT GGTGATGGAC CCCTATGCGC GGGTCTCCTC CCCGGTCGCC
AAATCCGGCG CCGCCTTCAT GCAGATCATG AATCGCTCCG ACACGGACGA CCGGCTCGTC
TCCGCCACCT CCCCCGCCGC CGCGCGGGTC GAGTTGCACA CCCATGTGGA TGACGGCAAC
GGCGTGATGC TCATGCGCGA GGTCGAGGAC GGCTTCACCA TCCCCGCGGG CGAGACCTAC
GCGCTCCAGC GCGGCGGCGA TCACGTGATG TTCATGGGCC TCACCGACAG CTGGTCCCAC
GGCGACACGG TCCCCGTCAC GCTCGTCTTC GAGCAGGCCG GCGAGGTCAT GGTGGAGATC
CCCGTCGACC TCGAACGCAG CCCCGAGCAT GGCGGCCACG GCCATCAGGG GCACGGCCAT
GGCGGCCACA ACATGGGCAA CAAGACCAAC TGA
 
Protein sequence
MSFKAFALAA GLGLAALPAL AMDGPIMVMD PYARVSSPVA KSGAAFMQIM NRSDTDDRLV 
SATSPAAARV ELHTHVDDGN GVMLMREVED GFTIPAGETY ALQRGGDHVM FMGLTDSWSH
GDTVPVTLVF EQAGEVMVEI PVDLERSPEH GGHGHQGHGH GGHNMGNKTN