Gene Dshi_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2579 
Symbol 
ID5713477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2744733 
End bp2745137 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content65% 
IMG OID641268503 
Producthypothetical protein 
Protein accessionYP_001533913 
Protein GI159045119 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.164818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000131473 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGGAGA TCGTCATGCT CGGAAAACTC GCCACCCTGG CCGCCTTGGC TTGCCTGGCT 
GGTCCCGCCG CCGCGCAGGA GGTGCGCGGC CTGTTCCAGA CCGCCCCCAA CGACGATGGC
AATGTGGGCC ATGTGGAGTT CTACGATTGC GGCGGGCTGA CCTGCGGCAA GCTTGTGCGG
TCCTTCAATG CCGGTGGCAC ACCCATCGAG TCCCCGAATG TCGGGCGCAA CATCGTCTGG
GACATGCAGG ACGAGGGCGG CGGCAAGTTC GGCAAGGGCA AGATCTGGGA TCCGGGCGCC
GACAAGACCT ACCGCTCCAA GATGGTGCTG GAGGGCGACC AACTGAAAGT GTCCGGCTGC
ATCGGCCCGA TCTGCCGCGC CAATACATGG GTCCGCGTCC GCTGA
 
Protein sequence
MEEIVMLGKL ATLAALACLA GPAAAQEVRG LFQTAPNDDG NVGHVEFYDC GGLTCGKLVR 
SFNAGGTPIE SPNVGRNIVW DMQDEGGGKF GKGKIWDPGA DKTYRSKMVL EGDQLKVSGC
IGPICRANTW VRVR