Gene Dshi_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2554 
Symbol 
ID5713451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2719489 
End bp2719884 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID641268477 
Producthypothetical protein 
Protein accessionYP_001533888 
Protein GI159045094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000108731 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGCC TCAACGCACC GGACTACATG AAATTCCCCC TCACTGTGGG GCCGGAGGGG 
GCTGAAGTGT CGTCTCGGCT CGCCCATGTG CGCGAGATCA TCGAGCAGGT CTTGTTCACC
AACCCGGGCG AACGCTGGTT CCGGCCCGAG TTCGGGGTGG GGGCCGTGGC GCTGGTGTTC
GAGCCGAACG CGCCGCCGCT CTGGGAGGTG ACGCGCAAGC GGCTGACGGC GTCGTTGACC
GATGCGCTGG CGGGGGAGGT CGATCCCAAG ACCATCGAGG TGGGCATCGA CACGGCGGCC
TCGTCGGAGG CGCATCTGCT GGTCACGGTC GGCTTCACGC TCGCCGCGAT AAACCACACC
GAACGCAACA CCTATGCCAT CGGGGGGGCG GGCTGA
 
Protein sequence
MTRLNAPDYM KFPLTVGPEG AEVSSRLAHV REIIEQVLFT NPGERWFRPE FGVGAVALVF 
EPNAPPLWEV TRKRLTASLT DALAGEVDPK TIEVGIDTAA SSEAHLLVTV GFTLAAINHT
ERNTYAIGGA G