Gene Dshi_2503 details

Gene Information

• Locus tag: Dshi_2503
• ID: 5713400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: -
• Start bp: 2661268
• End bp: 2668737
• Gene Length: 7470 bp
• Protein Length: 2489 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 641268426
• Product: hypothetical protein
• Protein accession: YP_001533837
• Protein GI: 159045043

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.260274
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGAAGATAT TACAGTATTT TGCGGCGGTG GGCGGCGGGC CCATCAACAC CTGCGATCAG 
GCTCAGGCAC CATCATGTCC GCATGACGGT GACCACTGGG CCCCGCTGGC CGAATACAAC 
TTGCTGGTGA TCGAGCTTCC CGCCGATTTC TCGACGCAGA ACCCTGGAAC CACCCTGACC 
GCGCAGATCG TGGCGGTATC GAACGAACCG GTGGGGCCGC AAGCCTCCGG CAGCGCGATC 
CTGACGGTGG ACCTGGCCGC CGAGGGCGAT ATCGAGATCA CGGGGCCGGG GACCCTGGCG 
CTGGCGGAAA ACGACGCGCC CGGAGATACC GATGAGGACA CGACCTCCCA GGCGCCCTTG 
CAGTTTCGTC CGTTCGATGC GCTGCAGGCC ACGGCGCCGG ATACGGATGG CTCCGAAGCC 
GTCGCGCAGG TCGATGTCAC ACTGACCGGC CTGCCCGCAG GCGCCACCTA TTCCACCGGG 
GGCGGCTTCG TCGCGGTCCC GGTGGGCGGT GTCCTGCCCA CCTTGACCCC GGCGGACTAC 
ACCGCCCTGA TCATTCAACT GCCCAGCGAT TTCTCGACCG CGTCTCCCGC CGCCACGCTC 
GCAGGCACGG TCACCTTCCG CACCGACGAA GCCCTTCTGG CGGGGGAGGG CGATACCGGC 
TCCACCGACG GGGTCGAAAC CGCGGGCTTC ACGGTCACCG TCACGGATGA GGCGGATGTC 
GACCTGCGCC TGGCCGACCT CACGGTTGCC GAGGATGCGA TCCTGCTCGA TCCGTCCGTC 
TCCGAGATCC CGCTCAATAT CGACGCCGTC CTTACGGATA TCGACGGCTC TGAAACCATC 
ACCGGCGCCT CCATCGCATT CTCCGGTCTG CCGACCGGTG GCCCGACCAC GCTCAGCGAC 
GGCACGGTCC TGGCCGGCCC CGCGGCAACA TGGACCGGCA GCTTCGCCGC GATGCAGGGG 
CTTGGTATCG CGTCATTCCC CGAACACTTC TCGGGCATTG TGACGATTAC TCCGACGGTC 
GTGACCGACG AGGGCGACCC GGCCGGGACC AGCGCGACGT TCCTGCTGAA CGTCACGCCC 
GTGGCCGAAC CCGAGGTCAC GCTTTCCGTG GACGCCACCG AGGCGCAAGT CACCGCCACC 
GGGCCCGACA GCTTCGCGGT CAAGGAGGAC ACGAGCTTCC GGCTCCTGAT CGATGCCACT 
ACCCCGGACC AGGACGGCAG CGAGAACCTG AGCCGGATCG TGATCGACAA TGTGCCCGCA 
GGCTGGTTGC CCGAAGGTGC GGTGCCGCCC GGCCTGTTCG AGACCGGGGG CGGCGACGTG 
GCAAACGCCA CCGTTTCCGG CGGCCGCCTG ACCATCACCC TGAACACCGG CGTTGCGAGT 
TTCGCGGGCG CGCTGCGCGT CACCCCGAGC GAAAACGAGG ACCGCGATGT CGAGACCATC 
GTCGGCGCAG ACCTCGCGGC GACGGTCACG GCGGTCGATA CGGCGACCGG CTTGCCCGAC 
AATACGGCGA CAGCCGGGGA CGACACGGAT GTTGATCTCG ACGCGGTTGT CGATCCGATC 
GATCTTGCCG TGGCGGATGC AGCGACCGAC GAGAACACCG GCGGGCGCGC AACGCGGCAA 
CTGAATATCA CCAATGTCGA TTTGCGGGAC ACCGACGGCT CCGAAGCGTT CGAGAGCGTC 
GAGATCACCC TGACCGTGCA GACCGAAAGC GACCCGTATG ACCCCGCCAC CCTGGAATTG 
CGGATCGGGG ATGGCGGGAT CAGCGGCTTC GTGACGATCA CCCAGACCGG CAGTACCGCC 
GACACCGTGA CCTACGAGGT TCTTCCGGTC GCCGGAACGA CCTCTGCGCA ATTCGCCACC 
GCCCTCGAAG CGCTCCAGGT GCGGGTGGAC CAGAATTTCA GCGGCATCAT CGAGACCGAA 
GGCACGATCT TCTGGTCCGA GACCCAAACC GGCGATACCG AGATCGACCC GTCCGACAAT 
CCGGCTTCGG AGGATTTTGC CACAACCATC ACCTTCCGCC CCGTCGCCGA GGCGGAGCTG 
AGTGCCTCGG TCTTCGTCAC AGACAGTGCC TTCTCCGCCG ATGGCACCAC GGCCGTGTCC 
GGCATTGCCC AAAACGCAGA CACGCAGGCA AGCGGGACGC TGACACTGCT GGAAAGCACC 
GATGACGGCT CGGGGCAGGG TCAGGTGTCG GTCTTCGTTG GCATCGACGC CGCAACTCCC 
GACCCGGACG GCTCCGAGGC GCTGCAAAGC GTGGTGGTCT CGAATATCCC GACCTCCTGG 
ATCGACGAGC GGCTGACTGG CGCCGCCCTC GACCCCAGCG CCTTTTTCAT CCAAGACGGG 
ACGGCACCGC TCTCGGCGGC GGAGTTCGCC AAGATCGACA CGGCGCTCTA CGACCCGGGC 
ACAGGCGCCC TGACCCTGAC TTTCGTGCCC GAAGTGACCG CGTTCGAGGC GGCGATCCTG 
CTGCAGCCAG CCTTGTACGA AGACTACGAC GTGGACCGCG CCCCGGGGGA CCCGTTTACC 
GCGGATGGCA CCTTCTTCGC CGATGACATC ACGGTGACGG CCACCACGGT CGACGACAAC 
TCCGCGCATA CCGCCACTGC ATCCGCCAGT GTCGAGATCG ATGTCGATGT CGACCCGGTC 
AACAACATCG CCACCATTCC GACGATCCCG CTGAATTTCG AGGATGTCGT GGATGCCGCG 
GGCGGGATCG CCCAAATCCC GCTTTCGCCG TTTATCCGCG ACATGGACGG TTCCGAGACG 
ATCACGGCGG TGGTCCTCAA GGACGTTCCC GATAACCTCA GCGTCTATGC CACCGACCCC 
GAGGATCCGA CGGGCCCGAA AGTGCCCGTG CTTCTGACCG AGATCAACAG CCCGCCGGGC 
TTCAACACCT GGAGCCTCGA GAACGGCCAG TGGCTCGACG CCGAGGTGCG CGGCGTCGCG 
TTGCACGCCG CAGGTGATTT CCCCATCGAG ATCGACGTGG TCACAACCGA GGACGACGGG 
GGCGGGACCG CGGTCACGAC GCTCAACACC GTTTTCCGGG TCGAACCGGT CGTCGATGGC 
GGCGATCCCG GCCGCAGCGT GACGGTGAAT GAAGACACCG CCATTCAGGT GCCCATCGAT 
GGCAACCTGA TCGACAATCC GAGCAACTCA CCCGACTCTC CCGAGGCCAT CCTGGACGTG 
GTCGTCATCC GGGAAGTCTT TCCCGATTCC TTCGGCAGAT ATCCGCGCTT TTTCGACGGC 
GAGCCGGTGC CCCTGCCCGG ATCGCACGGC CAGTTCACGA ACGAGTTGGG GCTGACCATC 
CCGCTCCCGG GTGGGGCCGG GGATTTGACC CTGACCGCGA CGCAAGCCAG CAACCTCTGG 
GTTCTGCCGG GCCGGGACAG CAACGAGGAT GTCTCCTTCG ATGTCCAGGT GACCTATTTC 
GAAACTATCG AGCCGACACA GGCCACGATC GGCACCGGGC GGGTGAGCCT CGATGTCGTG 
GGCGTGGCCG ACGACCCGAT CGTCGACGCG CAGGACGCCG CCGCCTTCCC CGCGCCGGGC 
CAGATCGATG ACGCGGTTTT CCGCCCGTCC GAGGTCGTCG ACGGCACTCC GAACTCCGAG 
CGGGTCTATG GCTATGCCGG GTTCGATGAC GGCCCGTTCC TGCTCGACAG CCGCCTGCAG 
GATAGCGTGA TCACCTCCGG CACCCTCGTG CCCGACCCGG ATCAGGTGTT CACCACAGAC 
GGGGTCGTGC CCTTGTCGGG GACTGGGACC GAGATCCTGG TTCCCGAAGG TGACCCCGCC 
GCGGATTTCG ACGGCTCCGA GGTTGTCTAC TACGTGATCA CCGGCGTCCC GGACACGGTG 
TCGTTTCTGA ACGCGTCACC CGTGGACCTC AGCGGGGCGA GCTTTGTCGT CGGCGTCGAG 
CGGCTCGACC AGTTGGAGTT CGTGCCCGAC CAGGGCATCA GCGAGGTAAC CTATTATGAC 
ATGGCGCTGA ACGTTATCGT TCTGGAAGAC GACCAGGTAT TACCGGATTT TACCGGCCTG 
ACGCCGGAGG AAGTCTTTGC CGAGATCAAC AGCCTGCAGG GCGGCTCGGT CCGCTCCACG 
GATTTCACGG TCGTTGTCGT GCCGACCCCG GGCGGCACGG GGCCAACCCC CTGCACCCCG 
GAACAGGACC TGCCGCTGCC GGAGTTGACG ATCGAAGGCT CCGGTCCCGA AGACAGCGTC 
ATCCCGCTCA CGATCACCCT GACCCCCAAT CCGCCTTTCT GGAGCACGAT TGCCGATGTT 
TCCACCCTGC CCAACGGGGT GCAGGGCAGC CTCGGCGTGG GGATCAGTGT TCCGGCCGGT 
GCCGTGCTGT CCTCCTCGGT GCCCGGCGCG GTGCTGTTCG ACCCGATCAC CGGCCTCTAT 
GTCGTTGATT TCGAACAGCT GGGTGTCAAT CCATCGGATC CCACTCAGAC TGCCGTGCCG 
CTCCTGTTCA CCCCGCCCGA GCATGAATCG AGCCCCGCCA ACACTTTCGA TCCCGACGAT 
ACGTTCGGCC CGGCCGACCC CTATGATGAG CTCGAAGCAC TTGAATTCCA GCTGATCCTG 
AACAATGTCA CCTGCGGCAC GCAGACCAGC GGCACAGGCA CCGTCGACCT GGAAATCATA 
CCCGTCGCCG ATGGCCCGCA GATCAGCTTC GCCGCCGCTG CCAGCGTGCT GGAGGACACC 
GACTATCTGC CGGGCATCAC CATCGAAGGG ATCGATCCCG GCGAACAGCC CTTCGGACAG 
GTTTTTATCG AGGTGGATGC CACCAATGGC GGGCAGATCT TCGACGCTGC CGGCAATGCC 
CTGACGGGCA GTCCGACCGC GGATGGGTTC GTGCGCTATG CCCTCGACCA GGCGGATCTG 
GCCGGTGTCT CGGTCCGCGC GGCGGAGCAC TATAGCGGCC CGCTGGAAAT CCGCGTCACC 
GCCGCATCGC AGGACATCAA CCTCGAGACC GCCGAGACGA CCGTGTCGCG GGTGATCGAC 
ATCATTCCGG TCGCGGACTT GCCCGAGTTC ATCTTCGACA CCTCGGAAAT CGACCCGGAC 
ACCGGCGCGC CCTTCGTCGA TCCCGCCCAG ACCCCGACAG TGATCCAGGC GATCGAGGAT 
GTGCCCTACA ACCTGTCCAC CGGGTTGCAA GCCTTTTCCC CCGACCGGGA CGGGTCCGAG 
ATCGTCTCCA TCGTGATCTC CGGCATTCCG TCCTACCTGC TGGTCCAGGC CGGCGCGGGG 
GCCCCGGCGG GCGGCATCAT CAACAACGGC GATGGCAGCT TCACCATCTC CGAAGACGCC 
TATCCGTTTG TCGAGCTGGT GCTGCGGGAC GAACATGCCC GCACGCCCGA TCCGCTCGAC 
AGCACCATCG CGGATGGCAT CCCGCTGGAG GTTACGGTCA ATACGTTCGA GCTCGACAAT 
GCCGATCAGA ATACCGCCTC GACCGAGTTC ATCTTTCGGG TCCGACCGGA TGCTGACGTC 
CCGAGCCTGA CCGCGTCCCT TGAGCCGGAA ACCGGCGTGG AAGACGATGG CAGGGCTTTC 
GAGCTCGTTC TCGCAGGTAC CACCCCGGAC CCGCATGAGG ATATGGAGTT CGTGGTCTCC 
CTGCCGCAGG GAGGCACGCT CTTTGTCGAT GGTGTCGCGC AGACAGCGCA ACCCGACGGC 
ACGTTCCTGC TCCAGTCCGG TGTGCCCATC GCGTCCCCGG GCGGCGGGGG GCTCGTCTTC 
GGTGTTCCGG GCACAGTCAC CATCGCCCCC CCCGCTGATT TTTCCGGCGA CTTTACGGTT 
TCGGCTGCCG CCGTCACGCT CGATCAAAGC GTGGATGGCA GCTTCATCGA CCGGCAAAGC 
TCCGATCCCG CCGATCTGGA CGTGGTGATA ATCCCCGCGG CGGACTTGGT TGTCACGCAA 
ACCAACGATA CCCTGGTGAT CGACGAAGGC GATCCGCCGG ACCAGCCGTC CTTCACCCCT 
GCCGACGAGA TCACGATTGC TGTCACGGAT AGGGACGGCT CCGAAACCGT CGACAGCCTC 
GTCTATACGC TGTCGGGCGT GCCGACCGAA ACGACCTATA CGGTTGGCGG TACGCAGACG 
GCGGTCACGG GGCCCGACCT TGTCTTTTCG GGCTCCGAGG CGGAGTTTGC CACACTGGAC 
ATCCAGTTTC CCGAGAATTT CGCAACCAAC GGCGCCCCCC TTGCCGGATC TCTGGCCGTG 
ACCACCAACG AGGGCGGGGC AGAGACCGTC AGCTTTACCG TGGATGTGAC CGGTGAGTTG 
GACGTCGCGG TCACCGTCAC CCCGACAGAC CAGGCGCAGA CCGGCATGGA TGTGACCGTG 
CCCCTCGGCA TCGACGCGGC CGTGATCCTG CCGCAGCCGG GGGATGTGGA AACGCTGGAC 
GAGGTGGTCG TCACTTTCGA TACCGCGCTT CCCGCCGGGG CGGTGCCCTC GGCCGGAGGG 
CTCTCGGGCG ACCGCACAAC GCTGACGGTG AGCCGTCCTG CGGCGACCAA TTCGCTCGAT 
TTCACGATGC TGGTGGCGGC GCTGGCCGTG ACCCTGCCGG GCGATTTCTC CGGCCCGCTC 
TCGGGCGCGG TCACGGCGAC GACCACGCAT GGCACCTCCG CCCCGGTGGC GTTTACGGCG 
AACGTGAACG ACCAGCCGGT CGTGTCGGAC CCGGTCGATC TGGGAGAGAC CGCGCAGACC 
ACGCTGGTGG TTCCGGTCGG CACCTTCCTC GGGAATGCCA GTGATCCCGA TGGCCTTGCA 
GGGATTTCGA ACCTGGTCAG TGATGTCGGC GACGTGACTG CCATCGTGAA CGGCAGCGAC 
GTCGAGATCA CCGTGCAGAA CGGCTACGCC GGCCCGGTCA GCTTCAGCTA CGACATATCG 
GACAGTGGCA GCCCGGTCGC CGTCACCCCC GCCACCGCGA CGCTCGACAT CACAGTCGAG 
TTCGCGCTTG CCTTCTCGGG GGGGCAGACC ACCGGCCCGG ATGGCACCCT GATCCCGGTT 
GCCGACGATC TGGACGGGGG CACAGGCCCG ACCGATGTGG CCCTCGGCAC TGCCGGGGCC 
GAGGCGGTGA TCGTCGATCC AGCCGCGCGG GATTACGCCG GGATAGAGAG ATTCTCGATG 
CTGGACGGAA ACGACCTGGT GGACCTGTCC CAGGCGATGA CGGGCTTTGC CGTCGATCTC 
GGGGCCGGGG ACGACGCCGT GCGCGGCGGG GCCGGGGCCG ACACCCTGAC CGGCGGCGCC 
GGTGCGGACA GTTTCGCGCT CGGCGTGGCC CTTGATATCA CGGACGTCAT TACCGACTAC 
GAGGCGGGCC TCGACCAGAT CGACCTCAGC AGCGTCCTGA CCGGCAGCGA TACGCTCGAC 
GGGCGTGCAA GCTTTGACGA TACCACCGGC ACCCTGACCG TGCTGGGCGA GGCCGCGGCG 
CAGATCACGG CGGCGGGCGG CGGCATTCCC GCCAGCGTCG AAGTTGTCTT CGAAAATGCC 
AGCGGCGCCC AGACAACGGC CGTGATCTGA 

 

Protein sequence

MKILQYFAAV GGGPINTCDQ AQAPSCPHDG DHWAPLAEYN LLVIELPADF STQNPGTTLT 
AQIVAVSNEP VGPQASGSAI LTVDLAAEGD IEITGPGTLA LAENDAPGDT DEDTTSQAPL 
QFRPFDALQA TAPDTDGSEA VAQVDVTLTG LPAGATYSTG GGFVAVPVGG VLPTLTPADY 
TALIIQLPSD FSTASPAATL AGTVTFRTDE ALLAGEGDTG STDGVETAGF TVTVTDEADV 
DLRLADLTVA EDAILLDPSV SEIPLNIDAV LTDIDGSETI TGASIAFSGL PTGGPTTLSD 
GTVLAGPAAT WTGSFAAMQG LGIASFPEHF SGIVTITPTV VTDEGDPAGT SATFLLNVTP 
VAEPEVTLSV DATEAQVTAT GPDSFAVKED TSFRLLIDAT TPDQDGSENL SRIVIDNVPA 
GWLPEGAVPP GLFETGGGDV ANATVSGGRL TITLNTGVAS FAGALRVTPS ENEDRDVETI 
VGADLAATVT AVDTATGLPD NTATAGDDTD VDLDAVVDPI DLAVADAATD ENTGGRATRQ 
LNITNVDLRD TDGSEAFESV EITLTVQTES DPYDPATLEL RIGDGGISGF VTITQTGSTA 
DTVTYEVLPV AGTTSAQFAT ALEALQVRVD QNFSGIIETE GTIFWSETQT GDTEIDPSDN 
PASEDFATTI TFRPVAEAEL SASVFVTDSA FSADGTTAVS GIAQNADTQA SGTLTLLEST 
DDGSGQGQVS VFVGIDAATP DPDGSEALQS VVVSNIPTSW IDERLTGAAL DPSAFFIQDG 
TAPLSAAEFA KIDTALYDPG TGALTLTFVP EVTAFEAAIL LQPALYEDYD VDRAPGDPFT 
ADGTFFADDI TVTATTVDDN SAHTATASAS VEIDVDVDPV NNIATIPTIP LNFEDVVDAA 
GGIAQIPLSP FIRDMDGSET ITAVVLKDVP DNLSVYATDP EDPTGPKVPV LLTEINSPPG 
FNTWSLENGQ WLDAEVRGVA LHAAGDFPIE IDVVTTEDDG GGTAVTTLNT VFRVEPVVDG 
GDPGRSVTVN EDTAIQVPID GNLIDNPSNS PDSPEAILDV VVIREVFPDS FGRYPRFFDG 
EPVPLPGSHG QFTNELGLTI PLPGGAGDLT LTATQASNLW VLPGRDSNED VSFDVQVTYF 
ETIEPTQATI GTGRVSLDVV GVADDPIVDA QDAAAFPAPG QIDDAVFRPS EVVDGTPNSE 
RVYGYAGFDD GPFLLDSRLQ DSVITSGTLV PDPDQVFTTD GVVPLSGTGT EILVPEGDPA 
ADFDGSEVVY YVITGVPDTV SFLNASPVDL SGASFVVGVE RLDQLEFVPD QGISEVTYYD 
MALNVIVLED DQVLPDFTGL TPEEVFAEIN SLQGGSVRST DFTVVVVPTP GGTGPTPCTP 
EQDLPLPELT IEGSGPEDSV IPLTITLTPN PPFWSTIADV STLPNGVQGS LGVGISVPAG 
AVLSSSVPGA VLFDPITGLY VVDFEQLGVN PSDPTQTAVP LLFTPPEHES SPANTFDPDD 
TFGPADPYDE LEALEFQLIL NNVTCGTQTS GTGTVDLEII PVADGPQISF AAAASVLEDT 
DYLPGITIEG IDPGEQPFGQ VFIEVDATNG GQIFDAAGNA LTGSPTADGF VRYALDQADL 
AGVSVRAAEH YSGPLEIRVT AASQDINLET AETTVSRVID IIPVADLPEF IFDTSEIDPD 
TGAPFVDPAQ TPTVIQAIED VPYNLSTGLQ AFSPDRDGSE IVSIVISGIP SYLLVQAGAG 
APAGGIINNG DGSFTISEDA YPFVELVLRD EHARTPDPLD STIADGIPLE VTVNTFELDN 
ADQNTASTEF IFRVRPDADV PSLTASLEPE TGVEDDGRAF ELVLAGTTPD PHEDMEFVVS 
LPQGGTLFVD GVAQTAQPDG TFLLQSGVPI ASPGGGGLVF GVPGTVTIAP PADFSGDFTV 
SAAAVTLDQS VDGSFIDRQS SDPADLDVVI IPAADLVVTQ TNDTLVIDEG DPPDQPSFTP 
ADEITIAVTD RDGSETVDSL VYTLSGVPTE TTYTVGGTQT AVTGPDLVFS GSEAEFATLD 
IQFPENFATN GAPLAGSLAV TTNEGGAETV SFTVDVTGEL DVAVTVTPTD QAQTGMDVTV 
PLGIDAAVIL PQPGDVETLD EVVVTFDTAL PAGAVPSAGG LSGDRTTLTV SRPAATNSLD 
FTMLVAALAV TLPGDFSGPL SGAVTATTTH GTSAPVAFTA NVNDQPVVSD PVDLGETAQT 
TLVVPVGTFL GNASDPDGLA GISNLVSDVG DVTAIVNGSD VEITVQNGYA GPVSFSYDIS 
DSGSPVAVTP ATATLDITVE FALAFSGGQT TGPDGTLIPV ADDLDGGTGP TDVALGTAGA 
EAVIVDPAAR DYAGIERFSM LDGNDLVDLS QAMTGFAVDL GAGDDAVRGG AGADTLTGGA 
GADSFALGVA LDITDVITDY EAGLDQIDLS SVLTGSDTLD GRASFDDTTG TLTVLGEAAA 
QITAAGGGIP ASVEVVFENA SGAQTTAVI