| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2480 |
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| Symbol | |
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| ID | 5713376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2632408 |
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| End bp | 2633268 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268403 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001533815 |
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| Protein GI | 159045021 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.361512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CCGGACCTGA CCTGTCCCGC CGCGCCACCC TTCTGGGGCT CGGCGCCACC
GGGCTCACCG GCGCCACTGT CACCGCCGCA ACCGCCCAGA CCGCGCCCTC CCGCCCCTTG
GCGGGCAAGG TCGCCATCGT GTCCGGGGCA CGCAACAACA TGGGGCGGGC CTTCGCTATC
AAGATGGGCG AGATGGGCGC CGACGTGGTG GTCCATTACC ACCGGGCGGA AACCCTCGAC
CAGGCCGAAG ACACCGCCCG GCTGGTCGAG GCCGCAGGCG GGCGCGCAGC CCTGACCATG
GGGAATCTTG GCCAAGTCGA GAACGTGCGC GCCATGTACG ACACCGCCGA GCAAGCCTTC
GGCGGGGTGG ATATCGTGAT CAATAACGCA GGCGCCATCC TCAAGAAACC GATGGCGGAA
TTCACCGATG CCGAGTTCGA GCAACTCGAC GCGATCAACA ACCGGGCCCT GTTCTATTCC
CTGCGCGAAG CCGCCCTGCG GATGCGCGAC GGCGGGCGGA TCATCAACAT CGGCACCTCG
CTGAAGGCCG GGGCCGCGCC AGGCTACACG ATCTATTCCG GCACCAAGGC CCCGGTGGAG
GAATACTCCC GCATGCTCGC CAAGGAGTTG GGGCCGCGCC TTATTACCGT GAACACCATC
GCCCCGGGCC CCGTGGACAC GCCGTTCTTC CACGCCCAAG AAACCGAGCA GAGCGCAGCA
TTCGCAGCGC GGCTCTCGAC CGAGCAGCGG CTGGGCCGGA TCGAGGATAT CGCGCCTCTC
GCGGGCTTTC TCGCCAGTCC CGAGAGCCAG TGGATCAACG GCCAGACCGT CTGGATCAAC
GGCGGCTACC TGACCCGCTG A
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| Protein sequence | MTQTGPDLSR RATLLGLGAT GLTGATVTAA TAQTAPSRPL AGKVAIVSGA RNNMGRAFAI
KMGEMGADVV VHYHRAETLD QAEDTARLVE AAGGRAALTM GNLGQVENVR AMYDTAEQAF
GGVDIVINNA GAILKKPMAE FTDAEFEQLD AINNRALFYS LREAALRMRD GGRIINIGTS
LKAGAAPGYT IYSGTKAPVE EYSRMLAKEL GPRLITVNTI APGPVDTPFF HAQETEQSAA
FAARLSTEQR LGRIEDIAPL AGFLASPESQ WINGQTVWIN GGYLTR
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