Gene Dshi_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2463 
Symbol 
ID5714119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2614711 
End bp2615373 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID641268386 
Producthypothetical protein 
Protein accessionYP_001533798 
Protein GI159045004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.258952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCCA AGCTTCAGAT CCAGGCGTTT TCTGACAATG AGCTGCGGTC GCAGACCGGC 
AGCTACAGCT TGCAGATCAA CCCCAACTCC CTGTCGCACA GCCACTCGGC CAGCTTCGCG
CCCGCCAAGG ACAACGACGC GGCGGGCACT GTTCTGAAAT TCCACACCCA GAACGCCGAA
GAAATGTCGT TCGACTTCGT GATCGACGCC ACCGGCGTGG TGCCTGGCGT GACCGATGTG
GCCAAGGAAA TCGAGAGCTT CCGCACCCTC GCCTATACCT ACCAGGGCGC GCAGCACAGC
CCGAACTACC TCAAGATCGT GTGGGGCGGG CTGACCTTCA ACTGCATGCT CACCAGCCTG
AAGATCGCCT ACCAGCTCTT TGCCCCTTCC GGCGCGCCTC TGCGGGCCCA ACTCAGCGTG
GCGTTCCGAC AGCACCTGAC GCCCGAGGAT CTCGCCCGAC TGGGGGACAA GAAATCCGCC
GACCTGACCC ATGCCCAGGT GGTCACCGCG GGCAGCACTC TGCCGCTGAT GGCCTACGGG
GTCTATGACC GGCCGGACCT TTATCCGCAG GTCGCGCGGG CCAATGACAT GAACGACCTC
GTGCATCTGA CCGCGGGCCG GGCGCTGAAC TTCCCGCCCT TCGAGGAGAG CCGCCATGAC
TGA
 
Protein sequence
MLSKLQIQAF SDNELRSQTG SYSLQINPNS LSHSHSASFA PAKDNDAAGT VLKFHTQNAE 
EMSFDFVIDA TGVVPGVTDV AKEIESFRTL AYTYQGAQHS PNYLKIVWGG LTFNCMLTSL
KIAYQLFAPS GAPLRAQLSV AFRQHLTPED LARLGDKKSA DLTHAQVVTA GSTLPLMAYG
VYDRPDLYPQ VARANDMNDL VHLTAGRALN FPPFEESRHD