| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2459 |
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| Symbol | |
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| ID | 5714115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2608289 |
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| End bp | 2612149 |
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| Gene Length | 3861 bp |
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| Protein Length | 1286 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641268382 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533794 |
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| Protein GI | 159045000 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.505985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC CGTCCCCCCA TACCGCCCAT ACCGGGCACC TGTCCCGCGC CGCGCGGGCG
CCCGAGGCTC TGGCCACGGA TTACTTTCGG CTCGATGAGC GCAGCCGGGC GCAACTGGTG
CACACGGCCA CGGGGCTGGC GCGGCTGCTG ACCTATTACG ATGCGCAGAA CCGACCCCAT
GGCCCGCGGC CCGAGGGGCA GGGCGCGTGG GAGGCGTTCT TCCGCCATGA TCTGACTTTC
CTTCTGGCCG AGATCGCCTC GGTCGATGCC GCCCTGGAAT ATCGCGCCAC CATGAGCGAC
ACCGCGCCGC AAGCGATGTG CCGCCGCGTG GTCATGGACA CGGTCCGGAT CTGGGACTGG
CGCGACCGCG CGCGCGAGAT GGCGGTGTTC GCAGCCCCAG ACAGCCTCGT GGCGGATGTC
GCCCATACCC TGTCCCGGCC CGACCAGACC GAGCTGACCA GCGCGCCCTT CACGGCGCTG
CGCCGGGCGC TCGATCCCCT GGAGGTCGAA GCGCGGGCCG AGGCCGCCCG CCGTCTCGGC
CCGACAGAGG TCTTCGCGGC TGCCTTGCCC GATCCTGCGG CGCTGTCGCG GGCGGTCAGT
GCGGCGAACC GTGCCACAGC GCAGGTCGCG CTGGCCGCCG AGACCTATCT CGACCGCGCG
CTGGCCGAGC GGCGCAACCA TCCCGGCCAT CTCGGTCTGT TCCTGGCCTT CGTGGACCTG
TTGCAAAAGG CGCAAGCCGA CTTGAACCGG ATGACCGACC GGCATCTCGA GTTCTATTTC
CGCAAGGTTC TGCGCAGCGC CCCGCAACCT GCGCGCCCCG ACAGCACCCA TGTCACCTTC
GCGCTGGCGC CGGGCGCGCG CGCGCTGACC CTGGAGGCGG GCACGCCATT GGTGGCGGGC
AGCGGCGCGG GACCGGAGGC GGCGATCTTC GAGCTTGACC GCGCGGTCGA AGTGACCGCC
GCCCGTGTCG CGCATATCCG CGCCGTGGCG GTGCAGCGCA ACATGGCCCT GCGGGATCGG
GGTGGTGCGC CCTTCGTCGA GGCGGTGGAT GTCTACCCGG TGGCCAATTC CGAAGACGGG
CGGGGCGCGC CGCTCGCGGA CCCGGACCTG GGTTGGTCGC CTTTCGGTCC CGGGCTGGAC
GCGCCGTCGC ATGTGGGCTT TGCCCTCGCC GCGCCGATCC TGGAGCTTGC GGGCGGGCAG
CGCGACATCA CCGTGACGCT GGCCTGTGAT CCCAAGGGTG AGAGCACGCT GGCGCGCGCA
TTGGCCGAGT ACGAGGCGGT GCTCGCCGAC CGCTACCAGG GGGCGCCGGA GGACACCGGC
TCAGGCAAGC TGCCCCCTGA CATTTTCGCG AAGTTTCTGG CCGAGGCGGT GCGGGTGTCG
ATCACCACCG CGACCGGCTG GCATCCGGTG TCCGAAGTCA CTCTCGGGGC GGATCCCGAC
GACCCCGATG CGCTGCGCCT GCGGCTGTCG GTGCCCGCCA CCGCACCACC GCTCGCGTCC
CATCCCGACA CCCATCCCGA GCCTGTGCTG CGCGTGGTCC TCAATCCCGC CGCGCGGGCG
TTTGCCTACT CCCCGCTCCA CCGGCTGCGC GTGCTGGGCG CGACCCTCGC GGTGGAGGTT
ACGGACCTCA CCACCCTGAA GATGGAAACC GATATCGCCC CGGTGGCGCC GGGAAAGCCC
TTCGCGCCCT TCGGGCCCAT GCCCCTGCCG CGGGCACGCC TGACGGTCGC CGCGCCCGAA
CTGGCACGCA AGCAGCCGTC GCAGCTGCGC CTGTGTTTCC ACTGGACCGG GCTGCCCCTG
CCGCCGGAGA CCTTCGCCAG CCATTATGCG GGCTACGCGC CCAAGCTGAG CGAGACCGAT
TTTCGCGCAA GCCTGGCGCG CAGCGACGGG GTGAGTTGGC ATCCGCTGCC GGTGCAGGGG
CCTGGTGTTG CGCGCCCGGA AAGGGACGCG CCGCTCTTTG GGATCGATGC CAAGGGCGGC
GTGGCCACCG AGACCGCGTG GCATGTCCCC CACCTGCCGC GCCCCGAGGG GCGATCCGAC
CCCGCGGCCT CCGCGCCCCT CGCCCGGCCC GACACCAGGC CCCCCGGCAC GCTCCGGGTG
GAGCTGACCG GCCCGCGATT CGGCTTCGGC CAGCGGCTCT ATCCCGAGCT CCTCGCCGCC
GCGGCGATGA AGCCCAAGCC CGGCGCCCTG TCCAAGGCGC TGAAGGCGGT CACGCCCAAG
GCGCTGGCCA AGGACACCGA GGCGCCGCCG CCCAGGCCAC CGCTGTTGCC GATGCTGACC
GGGGTCGGTC TGAGCTACCG CGCCGCCGTG CGTTGCGAGA CCCTGGGCGA GGGCGATCCG
ATCGCCTTCT ACAACTTGAT GGTGCATGGT CCGATGCGCC CCTCCGGCAG CCGGCGCCTG
CTGCGCGCGG ATCTCGACGT GGACGGCTAC CTGATGATCG GTCTGGAGCG CACCCGCCTG
CCGGAGACGG TTTCGCTCTT CTTCGACATC CGCGACAGCC TTGCCGAAAG CTGGGCGCCC
GGCGATCCCG GCCCGCGCCC CGGAGTGTGC TGGTACTACC TGGGCGCGGG CGGCTGGCGG
GAAGTGTCCG CGGGTGCCCT TCGCGAGGAC ACCACGCACG GGCTGACCAC CCGGGGCGTG
GTCGAGATTG CCCTGCCGCA GACCGCGCAA GAGACGGATC AGTTTTCCGA CGCGCCCCTG
GTCTGGCTTT CGGTGGCGTT GCGCGGCAAT CGGCGCCGGT TCGGCAGGAT TGTCGACATC
ACCACCCACG GCGTGCGTGC CACCCGCCGG ATCACCGCCG CCCCCGGCGT GGTCACGGCG
CAGGCGGGCG CCGCGCCGCA CTTGCCCGCG GGCCAGATCA CCCGGTTTCT CGCCGCGCGC
CCAGCCATCG CCAAGATCAC CCAGCCCGTG CCCAGTAGTG GCGGCCGCGC GCCCGAGCGC
GATGCGGCTT TCCGGGTGCG GCTGTCCGAG CGTCTCGGCC ACAAGATGCG CGCCCAGCGG
CCGATGGATT ATGCCCGCAT GGTGCTGCAG GAATTCGACG AGATCGGCGA TGTTCGCGTG
CTGCCCGATG GTGCGGGCGG GGTGGAGGTG GTCGTGGCAC CTGTCCGCGC GCCCGACCGC
CCGACCCGGT TTCCGCGCGT GCCCCTGCAC CTGCGCGCCG AGATCGCCGC ATGGCTGGCC
GCGCGCAGTT CTCTGCCAGT GGCGCGGATC GACGTGCGCA ACCCGTCCTA CGAGACCATC
CGCGTGCAGG CACACCTGGT GCCGCGACCG GGCAGCGTCG CGCTGTCGGT GACCGATGTG
ACGGCTCATG TGGCCGGGTT GATCGCGCCC TGGATGCAGA CCCGGGACGC CCCGATGCCG
ATCGGGCAGG CCCGGCTCGA CGTGGCCATG CTGCTGCAAC ATCTGCGCGC CATGCCCGGG
TTGGAGGAGG TCCTGGGCTT CTCGGTGCTG CATGTCTTTC GCACCCGGCG TGCCAATGGC
AGCGCGCTGG GGCCGCACGG GTTCAAGGAC AGTGCCCGTT TGCGCGACGC GCCCGACGGC
GATCGGGCGG CGGTCCTGCT CGGGGTGACG CCGTCCTCGG TCTTCGTGCC TGCGCGCCGT
CACCTGATCT CGATCCTGCC GCCGCGCACG GGTATCGGCG ACCTGGAGGT CGGGGCGGAT
TTCATCGCCG CAAGTCCCGC CAAGCTCGCC AGCTACAGCG CGGATCCCGC AAGTCTGCCG
CTGCGCCCGA GCCCTGCGGG GATCGGCAAC CTGACCATCG GGGAGGATCT CATCCTGACC
CGTCTCGAAG ACACGCGCCC CCCGGCCTTC GCCCCTGACA CAAGACACCA CGCGCTTGAT
GCGGTGTTCC TGGTAAAGTG A
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| Protein sequence | MTRPSPHTAH TGHLSRAARA PEALATDYFR LDERSRAQLV HTATGLARLL TYYDAQNRPH
GPRPEGQGAW EAFFRHDLTF LLAEIASVDA ALEYRATMSD TAPQAMCRRV VMDTVRIWDW
RDRAREMAVF AAPDSLVADV AHTLSRPDQT ELTSAPFTAL RRALDPLEVE ARAEAARRLG
PTEVFAAALP DPAALSRAVS AANRATAQVA LAAETYLDRA LAERRNHPGH LGLFLAFVDL
LQKAQADLNR MTDRHLEFYF RKVLRSAPQP ARPDSTHVTF ALAPGARALT LEAGTPLVAG
SGAGPEAAIF ELDRAVEVTA ARVAHIRAVA VQRNMALRDR GGAPFVEAVD VYPVANSEDG
RGAPLADPDL GWSPFGPGLD APSHVGFALA APILELAGGQ RDITVTLACD PKGESTLARA
LAEYEAVLAD RYQGAPEDTG SGKLPPDIFA KFLAEAVRVS ITTATGWHPV SEVTLGADPD
DPDALRLRLS VPATAPPLAS HPDTHPEPVL RVVLNPAARA FAYSPLHRLR VLGATLAVEV
TDLTTLKMET DIAPVAPGKP FAPFGPMPLP RARLTVAAPE LARKQPSQLR LCFHWTGLPL
PPETFASHYA GYAPKLSETD FRASLARSDG VSWHPLPVQG PGVARPERDA PLFGIDAKGG
VATETAWHVP HLPRPEGRSD PAASAPLARP DTRPPGTLRV ELTGPRFGFG QRLYPELLAA
AAMKPKPGAL SKALKAVTPK ALAKDTEAPP PRPPLLPMLT GVGLSYRAAV RCETLGEGDP
IAFYNLMVHG PMRPSGSRRL LRADLDVDGY LMIGLERTRL PETVSLFFDI RDSLAESWAP
GDPGPRPGVC WYYLGAGGWR EVSAGALRED TTHGLTTRGV VEIALPQTAQ ETDQFSDAPL
VWLSVALRGN RRRFGRIVDI TTHGVRATRR ITAAPGVVTA QAGAAPHLPA GQITRFLAAR
PAIAKITQPV PSSGGRAPER DAAFRVRLSE RLGHKMRAQR PMDYARMVLQ EFDEIGDVRV
LPDGAGGVEV VVAPVRAPDR PTRFPRVPLH LRAEIAAWLA ARSSLPVARI DVRNPSYETI
RVQAHLVPRP GSVALSVTDV TAHVAGLIAP WMQTRDAPMP IGQARLDVAM LLQHLRAMPG
LEEVLGFSVL HVFRTRRANG SALGPHGFKD SARLRDAPDG DRAAVLLGVT PSSVFVPARR
HLISILPPRT GIGDLEVGAD FIAASPAKLA SYSADPASLP LRPSPAGIGN LTIGEDLILT
RLEDTRPPAF APDTRHHALD AVFLVK
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