Gene Dshi_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2430 
Symbol 
ID5714086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2571609 
End bp2571947 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID641268353 
Producthypothetical protein 
Protein accessionYP_001533765 
Protein GI159044971 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02625] L-rhamnose 1-epimerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.878455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCATG TGGCGGGCGC GCTGATGGAA AAGATCGCCT TCAAGATGAT GCTGAACCCC 
GGCTGCCGGG AGGAATACAT CAAACGCCAC GACGCGATCT GGCCGGAACT GGTGGATCTT
CTCCGCAAGG CCGGCGTGTC GGATTACTCG ATCCACCTCG ACCCCGAGAC CGACACGCTC
TTTGCCGTCC TGTGGCGCAA GGAGGGGCAC GGGATGGACG ACCTCCCGAG CCATCCGGTC
ATGCAGAAAT GGTGGGCGCA CATGGCCGAC ATCATGCAAA CCCAGCCGGA CAACGCGCCC
GTGGTCACCC CGCTCGACAC CGTGTTCCAC ATGCCATGA
 
Protein sequence
MVHVAGALME KIAFKMMLNP GCREEYIKRH DAIWPELVDL LRKAGVSDYS IHLDPETDTL 
FAVLWRKEGH GMDDLPSHPV MQKWWAHMAD IMQTQPDNAP VVTPLDTVFH MP