| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2425 |
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| Symbol | |
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| ID | 5714081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2565692 |
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| End bp | 2567371 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268348 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533760 |
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| Protein GI | 159044966 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.306646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCT TCAACTTTTT CAACCTGATC TTTGGTCACG GCAACACCCA TGGCACCGAG
GACAAGGACA TCATTGTCGG TTCGTTCGGT GCGGACGATA TCAACGCCAA GGGCGGCGAT
GACCTCGTTT TCGGCCTGTC CGGGGATGAC AAGATCTCCG GCGGCGAGGG CGACGATCAG
CTTTTCGGTG GCTTCGGAGA TGACGTCGTC ATCGGCAACC GGGGCAGCGA TGCAATGTTC
GGCGGACAGG GGGATGACCG TCTGGTCTGG AACAACGGCG ACGGATCGGA CCTGATGGAC
GGCGGCGAGG GCCATGATGT CCAGCAGGTG AATTTTGACA CCGACCTGGT GAACGACGAC
CTGCAGAACG ACGACGTGGC CGAGTTCACG GTGACCGACG CGGGCCTCCA GTTCGCCCGG
ATCGAGGTGA ACGGTCAGTC CGAGCAGGGG CTGTTCCAGC TCGACATCCG CAACACGGAA
GTGCAGGAGA CGAATTTCGG CGGCGGCGAT GACACCGCGA TCATCAACAG CGGTGTTCTG
GACGCAATCC GGCTCGATCT CGACGGTGGC GACGGCATCG ACACGCTCGA CTTCAGCCAA
CTCGACACCA ACGTGTCGGT GAACCTCGAA ACCGGACAGA TCGTGGACAA CGTCTTCTTT
GCCGCCTCTT TGCCCGAGGA GTTCGAGATC GGGGCAAGCC TCGCCGCGGC CCCGGTGGTC
GAGACCTCGC AGGCGATCGA TTTCGAGAAC GTGATCGGCA CGGAATTCAG CGACGCTCTG
ACCGGCAATG CCTGGGACAA CGTGATTTCG GGCGGCGGCG GCAACGACCG TATCGCGGGC
GGCGCAGGCA ATGACACGCT CATCGGCAAC AAGGGCAGCG ACACCGTCGA TGGCGGGTCG
GGCGATGACA AGATCGTCTG GAACAACGGC GACGGGTCGG ACCTTTTTGA CGGGGGCGCC
GATGACGACG TGGTGCAGGT CAATTTCGAT ACCGATCTGG TGAACGAGGA TCTGCAGAAC
AAGGACGTGG CCGAGTTCTC GACCACCGAC GCGGGCGTTC AGTTCGCCCG GATCGAAGTG
AACGACCAGA CCGAGAACGG GCTGTTCCAG CTCGACATCC GCAACACCGA GACCCTGGAG
ACCAATTTCG GCGGCGGCGC AGACACGGCG GTCATCACGG GCGACGTGCT GGGCGAGATC
ATGCTGGATC TGGATGGCGG GGACGGCGTG GATACGCTCG ATCTGAGCCA GGCCTCCGGT
CCGGTCGGCG TGAACCTCGA GACCGGCGCG ATCGAGGTCG ACCACGGCGC AGGCCAGGCT
GCGGCCGCGA TCAACTTCGA GAACGTCACC GGGACCGACA GTAACGATGT CATCGTCGGG
AACGCACAGG ACAACGTCAT CCGGGGGGGG CTCGGGGACG ACACGATGTC CGGCGGCGCG
GGTGCCGATA CCTTCGTGTT CTTCGAAGCG GATATAGGCG TCGATGTCAT CCTCGATTTC
GAGATCGGAA TCGATCAGCT GGCCTTCTTC ACCAACGATC CGGAGGTCAC CCAGGACAGC
CTGCTGTCGA ACCTCGATCA GGTCGGGGAT GACGTGGAAC TGTCTCTCAA CAACAAGGTG
ATCACCTTCG AGGACACGCA GGTCGCGGAC TTCTCGGCGG ACATGTTCAT GATCGCCTGA
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| Protein sequence | MARFNFFNLI FGHGNTHGTE DKDIIVGSFG ADDINAKGGD DLVFGLSGDD KISGGEGDDQ
LFGGFGDDVV IGNRGSDAMF GGQGDDRLVW NNGDGSDLMD GGEGHDVQQV NFDTDLVNDD
LQNDDVAEFT VTDAGLQFAR IEVNGQSEQG LFQLDIRNTE VQETNFGGGD DTAIINSGVL
DAIRLDLDGG DGIDTLDFSQ LDTNVSVNLE TGQIVDNVFF AASLPEEFEI GASLAAAPVV
ETSQAIDFEN VIGTEFSDAL TGNAWDNVIS GGGGNDRIAG GAGNDTLIGN KGSDTVDGGS
GDDKIVWNNG DGSDLFDGGA DDDVVQVNFD TDLVNEDLQN KDVAEFSTTD AGVQFARIEV
NDQTENGLFQ LDIRNTETLE TNFGGGADTA VITGDVLGEI MLDLDGGDGV DTLDLSQASG
PVGVNLETGA IEVDHGAGQA AAAINFENVT GTDSNDVIVG NAQDNVIRGG LGDDTMSGGA
GADTFVFFEA DIGVDVILDF EIGIDQLAFF TNDPEVTQDS LLSNLDQVGD DVELSLNNKV
ITFEDTQVAD FSADMFMIA
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