Gene Dshi_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2417 
SymbolftsA 
ID5714073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2557114 
End bp2558451 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content68% 
IMG OID641268340 
Productcell division protein 
Protein accessionYP_001533752 
Protein GI159044958 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0849] Actin-like ATPase involved in cell division 
TIGRFAM ID[TIGR01174] cell division protein FtsA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000659549 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.582955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGG ACCTTTATTC GGCCCAGCGG GCCATGCGGA ACATGCGGCA GGCCGCGATG 
CAGCGCGGGG TGGTGGCCGT GTTGGACATC GGCACGAACA AGGTGGCCTG CCTGGTGCTG
AAATTCGACG GCCCCGCGCC CGAGCATGAG GCCGACGGCG TGGGCACCAT GGCGGGCCAG
TCCCGGTTCC GGGTGATCGG CGCCGCCGCG ACCCGGTCGC GCGGCATCCG CTTCGGCGAG
ATCGACGGCA TGGTGGAGGC CGAGCGCGCG ATCCGCACCG CCCTGCAAGG TGCCCAGAAA
ATGGCGCAGG TCCGGGTCGA TCACGTCATC GCCAGTTTCT CCGGCGCCGA GCCGCGTTCC
TACGGGGTGT CGGGGCAGGT GGAGGTCGCG GGCGAGGCCG TGTCCGAGCA GGACATCGCC
CAGGTGCTGG CGCGCTGCGA CCTGCCCGAT TTCGGCGAGG GGCGCGAGGT GCTCCATGCC
CAGCCGGTGA ATTTCGCGCT GGATCATCGG TCGGGCCTGA ACGACCCGCG CGGCCAGATC
GGCAAGCGGC TGGTGGCGGA CATGCATGTC CTGACCGTGC AGCAGACCGC GATCCAGAAC
CTTCTCTATG CGGTCAAGCG CTGCGATCTC GAACTCGCGG GCCTGGCGTC GTCCTCCTAT
GTCTCCGGCG TCTCGGCCCT GGTCGAGGAC GAGCGCGAAT TGGGCGCCGC CTGCATCGAC
CTGGGCGCGG GCAGCTCCGG CGTGTCGATC TTTCTCAAGA AACACATGAT CTATGCCGAC
AGCGTGCGCC TGGGCGGCGA TCACATCACC TCCGACATCT CCAAGGGCCT GTCCGTGCCG
CACGCCTTCG CCGAGCGGAT CAAGACGATC TATGGCGGGG TTCTGGCCAC GGGCATGGAT
GACCGCGAGC AGATAGAGAT CACCTCCGAG ACCGGCGATT GGGAACATGA CCGTCGCACG
GTCAGCCGGT CGGAGCTGAT CGGGATCATC CGCCCCCGGG TGGAGGAGAT CCTCGAAGAC
GTGCGCGACC GGCTGGTGGG GGCGGGGTTC GACCAGCTGC CCAGCCAGCA GATCGTGCTC
ACCGGCGGCG GCAGCCAGTT GCAGGGCCTC GACGGATTGG CGGCCAAGAT ACTCGGGCCC
CAGGTGCGCG TGGGCCGACC CCTGCGGGTG CGCGGGTTGC CGCAATCGAC CTCGGGGCCG
GAATTCGCTT CGGTGGTGGG GCTGTGCCTG CATGCCGCAC ATCCCCAGGA CGAATGGTGG
GATTTCGAGA TGCCCCATGA CCGCTACCCG GCCCGATCAC TCAAGCGCGC GGTCCGCTGG
GTGCGCGACA ACTGGTAG
 
Protein sequence
MMKDLYSAQR AMRNMRQAAM QRGVVAVLDI GTNKVACLVL KFDGPAPEHE ADGVGTMAGQ 
SRFRVIGAAA TRSRGIRFGE IDGMVEAERA IRTALQGAQK MAQVRVDHVI ASFSGAEPRS
YGVSGQVEVA GEAVSEQDIA QVLARCDLPD FGEGREVLHA QPVNFALDHR SGLNDPRGQI
GKRLVADMHV LTVQQTAIQN LLYAVKRCDL ELAGLASSSY VSGVSALVED ERELGAACID
LGAGSSGVSI FLKKHMIYAD SVRLGGDHIT SDISKGLSVP HAFAERIKTI YGGVLATGMD
DREQIEITSE TGDWEHDRRT VSRSELIGII RPRVEEILED VRDRLVGAGF DQLPSQQIVL
TGGGSQLQGL DGLAAKILGP QVRVGRPLRV RGLPQSTSGP EFASVVGLCL HAAHPQDEWW
DFEMPHDRYP ARSLKRAVRW VRDNW