| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2378 |
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| Symbol | alr |
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| ID | 5714033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2512525 |
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| End bp | 2513574 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268302 |
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| Product | alanine racemase |
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| Protein accession | YP_001533715 |
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| Protein GI | 159044921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.90664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CAACCCTCTC CATCGACCTC GACGCAATTG CCGCGAACTG GCGCGCACTG
GATCGTGCAT CCAACCGTCG GGTGGCGACC GGCGCCGTGG TCAAGGCCGA TGGCTACGGG
CTCGATGCGG GGCGCGTCGC GCGCACCCTC GCCCAGGCCG GGGCACGCCA GTTCTTCGTG
GCCGTCGCCG AGGAAGGTGT CACGCTCCGC AAGGCTCTCG GGCCGGGCCC GGCGATCAAC
GTCTTCTCGG GGCATATGGA GGGCGACACC CAGGCCATCG CTGGCGCACG GCTGACCCCG
ATGATCAACT CCGCCGAGCA ACTCGCCCGG CATTTCGAGG CCCTGCCACG CCATCCCTTC
GGCATCCAAC TCGACACGGG CATGAACCGG CTGGGGATGG AGGCGGACGA ATGGGCCGCG
GTGGCGGAAT TCGCGCTGGG GCAAGGGCCG AAGCTGGTGA TGTCCCATCT GGCCTGCGCC
GATGAGCCCG GGCATGCCGC GAACGCCGCA CAGCTGGCCG AGTTTCACCG CCTCACGGAC
GGGATCACCG TGCCGCGCAG CCTGTCGGCC ACGGGCGGCA TCCTTCTGGG CGAGGCGTAT
CATTTCGACA TGACCCGGCC CGGCATCGGG CTCTATGGCG GCGCCCCCTT CGGCGCGGCC
GAGCCGGTGG TGCGCCTGTC GATCCCGGTG GTGCAGGTCC GCGCGGTCAC CGCGGGCGAA
AGCGTGGGCT ACGGGTGTTC CTGGGTGGCG CAATCGGACG GGGCCATCGC GACGCTCTCG
GCGGGCTATG CCGACGGGTT GATCCGGGCA ATGAGCAACC GCGCCATGCT CTATGCGGGC
GACGTGGCTT GCCCGCTGGC CGGGCGCGTG TCCATGGACC TGCTCACCGT GGATGTCAGC
CATCTCGACG AGGTGCCGGA GGCGCTCGAT CTGCTGTGTC CCGCGCAAGG CGTGGACCGT
CTGGCCGAGG CCGCCGGCAC GATCGGCTAT GAAATCCTCA CTTCGCTGGG GCCCCGCTAC
GCCCGGCACT ATGCGGGCGG CGTCGCATGA
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| Protein sequence | MATATLSIDL DAIAANWRAL DRASNRRVAT GAVVKADGYG LDAGRVARTL AQAGARQFFV
AVAEEGVTLR KALGPGPAIN VFSGHMEGDT QAIAGARLTP MINSAEQLAR HFEALPRHPF
GIQLDTGMNR LGMEADEWAA VAEFALGQGP KLVMSHLACA DEPGHAANAA QLAEFHRLTD
GITVPRSLSA TGGILLGEAY HFDMTRPGIG LYGGAPFGAA EPVVRLSIPV VQVRAVTAGE
SVGYGCSWVA QSDGAIATLS AGYADGLIRA MSNRAMLYAG DVACPLAGRV SMDLLTVDVS
HLDEVPEALD LLCPAQGVDR LAEAAGTIGY EILTSLGPRY ARHYAGGVA
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