Gene Dshi_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2350 
Symbol 
ID5714005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2482885 
End bp2483898 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID641268274 
Productputative molybdopterin biosynthesis protein 
Protein accessionYP_001533687 
Protein GI159044893 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.294499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.371201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCG GAGCGGTTCC CTTGACCAAG GCGGAAGGCG CCCTGCTGGC CCATGCGCTG 
CGGCTGCCGT CGGGCAAGCT GTCCAAGGGG ACGGTTCTGA CCTCGCAGAT GCTGGCCGAG
ATCGCGCAGA CCGGTCTCGA CGAGGTGATC GTCGCCCGGC TCGAGCCGGG GGATATCGAT
GAGAACGCCG CTGCGGCGCG GGTGGCCGCC GCGCTGGTGC CAGAGGCCTC CCGGCCGCAT
CTGCGGATCA CCGAGCCCTT CACAGGTCGG GTGAATATCG TGGCGGAAGC CTCTGGAATA
ATTGAGATAG ATGTTCCGGC CATCGAGGCG CTGAACTCCG TCGATCCGTT GATTACCCTG
GCCACCGTGC CGCAATATGC CCGCGTTACA CCGGGTATGC TGGTCGGGAC GGTCAAGATC
ATTGCCTATG GCGTGGCCGC CGACGCCGCG CAGCAGGCCG CGCAGTGTGG CGCGGGCAGC
TTGCGTCTGC GCCCGGCCCG CTACAGCTCC GCGGGGCTGG TTCTGACGGA GTTCGGGCCC
GCCGATGCCC GTTTGCGCGA CAAGAGCATT GCGGCGATCG AGACGCGGCT GATCCAGCTG
GGCATGTCAT TGGCCGAGAC CCGCGTGACC GGCCACAACA CCGCCGAGAT CGGGGCGGCC
CTGGCCGGTC TCGATGGTGA GATGGCGCTC TTGCTGACCG CCTCCGCCAC CTCGGACCCG
GCGGATGTCG GGCCGGAAGG GGTGCGCGCG GCAGGCGGAC AGGTGACCCG GTTCGGCATG
CCCGTGGACC CGGGCAACCT GTTGTTTCTG GGCGAGATCG GGCCGCGGCC GGTGATCGGG
CTGCCGGGTT GTGCGCGGTC GCCCGCGCTC AATGGCGCGG ATTGGGTGCT GGAGAGGGTG
GCGTGCGGGT TGCAGGTCAC GGGCGCGGAT ATCGCGGCCA TGGGGGTTGG CGGGCTTCTG
AAGGAAATCC CCAGCCGCCC GCAACCGCGC CGTCCCCGGC GCAAGCCGGA GTGA
 
Protein sequence
MKFGAVPLTK AEGALLAHAL RLPSGKLSKG TVLTSQMLAE IAQTGLDEVI VARLEPGDID 
ENAAAARVAA ALVPEASRPH LRITEPFTGR VNIVAEASGI IEIDVPAIEA LNSVDPLITL
ATVPQYARVT PGMLVGTVKI IAYGVAADAA QQAAQCGAGS LRLRPARYSS AGLVLTEFGP
ADARLRDKSI AAIETRLIQL GMSLAETRVT GHNTAEIGAA LAGLDGEMAL LLTASATSDP
ADVGPEGVRA AGGQVTRFGM PVDPGNLLFL GEIGPRPVIG LPGCARSPAL NGADWVLERV
ACGLQVTGAD IAAMGVGGLL KEIPSRPQPR RPRRKPE