Gene Dshi_2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2349 
Symbol 
ID5714004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2482501 
End bp2482866 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content61% 
IMG OID641268273 
Productputative iron-binding protein iscA 
Protein accessionYP_001533686 
Protein GI159044892 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0909785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.541435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTA TCCCCGGCAA GGCCCCCGTG ACCATCACCG ACCGTGCGGC GGCGCATATC 
GGCAAGCTCA TGGCGCAGGG CAACAAGCAA GGCCTGCGGA TCGGGGTCAA GAAGGGCGGT
TGCGCGGGCA TGGAATACAC CATGGACTAC GTGGACGAGA TCGACCCCCA TGACGAGGTG
GTCGAGACCG GCGAAGCCCG GGTGATGATC GCGCCCATGG CGCAGATGTT CCTGTTCGGG
ACCGAGATCG ATTACGAAAC CTCCCTGCTC GAATCCGGGT TCAAGTTCCG CAATCCGAAT
GTGGTCGATG CCTGCGGATG CGGTGAATCG ATCAAGTTCG ACGAAGCGCT CGCCGCGAAA
ACCTGA
 
Protein sequence
MFGIPGKAPV TITDRAAAHI GKLMAQGNKQ GLRIGVKKGG CAGMEYTMDY VDEIDPHDEV 
VETGEARVMI APMAQMFLFG TEIDYETSLL ESGFKFRNPN VVDACGCGES IKFDEALAAK
T