| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2320 |
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| Symbol | dmdA |
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| ID | 5713975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2452182 |
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| End bp | 2453288 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268244 |
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| Product | putative dimethyl sulfoniopropionate demethylase |
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| Protein accession | YP_001533657 |
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| Protein GI | 159044863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTT TGCTCTCCCT TGCCCGCCGG CTGAGGCGCA CGCCGTTCTC CGAAGGGGTG
GAGGCCGCCG GGGTGCGCGC CTACACGGTC TACAACCACA TGCTGCTGCC GACTGTGTTC
GAGTCCGTCG AGGAGGATTA CCACCATCTC AAGCAGAAGG TGCAGGTCTG GGATGTGTCC
TGCGAACGGC AGGTGGAGTT GCGCGGCCCG GATGCGGGCA AGTTGATGCA GCTTCTGACC
CCGCGGGACC TGCGCGGGAT GTTGCCGGGG CAGTGTCTGT ATGTGCCGAT GGTGGACGAG
ACCGGGGGCA TGCTGAACGA TCCCGTGGCG CTGAAGCTGT CCGAGGACCG GTTCTGGATC
TCGATCGCCG ACAGTGATCT GCTCCTGTGG GTGAAGGCGC TGGCCAATGC CCGCCAGCTC
GAAGTGCTGG TCGAAGAGCC CGATGTCTCG CCCCTGGCGG TCCAGGGCCC GCTCGCCGAT
GATTTGGTCG AGCGGGTGTT CGGCGCGGAT GCGGTCAGCC TGCGGTTTTT CCGCTTCGGG
TTCTTCCAGT TCCAGGGTCA TGACCTGGTC GTTGCGCGCT CGGGCTATTC CCGGCAGGGC
GGCTTCGAGA TCTACGTGGA AGGTAGCGAT CTGGGCATGC CGCTCTGGCA TGCCCTGTTC
GAGGCGGGTG CTGATCTCGA CGTGCGCGCG GGCTGCCCCA ACGGGATCGA GCGGGTTGAG
GGCGGGCTAT TGAGCTACGG CAACGACATG ACCCGCTGGA ACACCCCCTT CGAATGCGGG
CTGGAGCGGT TCTGCAACGT GCAGACGGCC ATTGGCTGCC TGGGGCGCGA TGCGCTCCTG
CGGGTGTCCA TGGACGGCCC GAACCGCCAG ATCCGCCCCA TCGAGATCGA AGGCGAGCGG
GTGCCGGTCT GCGACCGGGC CTGGCGCCTT CTGGCCGGGG ACGAGCATGT GGGGCAGGTG
ACCTCCGCCG CGTGGTCGCC GGACTTCGAC ACGAATGTTG CCATCGGCAT GGTGCGGATG
ACCCATTGGG ACCCGGACAC CGAATTGATG GTCGAGACGC AGGAGGGGCT GCGCCCCGCC
CGCGTGCAGG AAAATTTCTG GATCTGA
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| Protein sequence | MTPLLSLARR LRRTPFSEGV EAAGVRAYTV YNHMLLPTVF ESVEEDYHHL KQKVQVWDVS
CERQVELRGP DAGKLMQLLT PRDLRGMLPG QCLYVPMVDE TGGMLNDPVA LKLSEDRFWI
SIADSDLLLW VKALANARQL EVLVEEPDVS PLAVQGPLAD DLVERVFGAD AVSLRFFRFG
FFQFQGHDLV VARSGYSRQG GFEIYVEGSD LGMPLWHALF EAGADLDVRA GCPNGIERVE
GGLLSYGNDM TRWNTPFECG LERFCNVQTA IGCLGRDALL RVSMDGPNRQ IRPIEIEGER
VPVCDRAWRL LAGDEHVGQV TSAAWSPDFD TNVAIGMVRM THWDPDTELM VETQEGLRPA
RVQENFWI
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