| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2293 |
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| Symbol | |
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| ID | 5713947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2422831 |
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| End bp | 2423928 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268216 |
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| Product | secretion protein |
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| Protein accession | YP_001533630 |
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| Protein GI | 159044836 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CCCAGACATC TCCGCCTTCC GGAGGCAGCC CAGCCAGAAC CGTTGCGCTG
GTGGTTGTCG TGGCGCTGGT GCTGATCGCT GGGCTTTATG CGCTGATGGA TCGCTATGTG
CCCAGCAGCC CGCGCGGGAT TGTATCGGCC AACGTGGTGC AGATCGCTCC GCGGGTCTCG
GGCACGATCA CCCGCGTTCA TGTGGCCGAC GATGCGATCG TTGAGGCGGG GGATCCGCTC
TTCTCGCTCG ATCCTCGCCC GTTCGAGCTG GCGGTGCGGC AGGCCGAGGC GAATCTGAAC
ACCGCGCTTC AGACCGTAGA TGCCTCGGGC GCGTCGCTGG TCGCGGCACA GGCCGCCGTC
ACCCAGGCCC GCACCGCGCT TGAAAACACG CAGGCCGAGG CCGACCGGAC CTTTCAGCTG
GAAGAGCGCG GCATCGTGGC CACCGCCCGC GGCGATGACG CCCGCGCCGC GGTCGAGTCC
GCTCAGGCCC AGCTGGATCA GGCGGAGGCC AATCTCGACA GCGCACGAGC GCAGCTTGGC
CCCGAGGGGG CAGACAACCC CACCATCCAG GCCGCCACGG CACAACTGGA ACAGGCGCAG
TATGACCTGG CCTCGACCAC GGTGACCGCG CCGCACCTCG GGGTTGTAAC CAACGTGACC
TTGTCGGAGG GGCAGTTCAT CGGGGCAGGA AGCCCGGCCT TGACCTTCAT CGACGCCGAG
GCCGGTTGGA TCACCGTCGA TCTGCGCGAG AACCAGCTTC AGAAGATCGA GGCGGGAGAT
CCGGCCCGCG TCTTGTTCGA TGCGCTTCCG GGGCGGATTT TCGAAGGACG GGTCCAGAGT
ATCGCCTGGG GTATCGCGCC AAGGCGCACG GTGCAGGGCG GGTTGGTTGC GAACCAGCAG
ACGACCCAGT GGTTCGAGCC GGCGCGCACA ATCCCCGTGC GGATCGAGCT GGAAGGCGGG
ATGGAGAACT GGCCCTATGC CGTCCGCGTC GGCGGCAAGG TCCATGCGGT GATCTTTTCC
GAGAGCGAAA CCGGCCCCAT CGCCTGGGTG GCGCGCGGGT TGCAACGGCT GCGCTCCTGG
CTCAGCTACC TGCACTGA
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| Protein sequence | MSETQTSPPS GGSPARTVAL VVVVALVLIA GLYALMDRYV PSSPRGIVSA NVVQIAPRVS
GTITRVHVAD DAIVEAGDPL FSLDPRPFEL AVRQAEANLN TALQTVDASG ASLVAAQAAV
TQARTALENT QAEADRTFQL EERGIVATAR GDDARAAVES AQAQLDQAEA NLDSARAQLG
PEGADNPTIQ AATAQLEQAQ YDLASTTVTA PHLGVVTNVT LSEGQFIGAG SPALTFIDAE
AGWITVDLRE NQLQKIEAGD PARVLFDALP GRIFEGRVQS IAWGIAPRRT VQGGLVANQQ
TTQWFEPART IPVRIELEGG MENWPYAVRV GGKVHAVIFS ESETGPIAWV ARGLQRLRSW
LSYLH
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