| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2253 |
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| Symbol | |
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| ID | 5713906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2373608 |
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| End bp | 2374894 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268175 |
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| Product | putative capsule polysaccharide export protein |
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| Protein accession | YP_001533590 |
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| Protein GI | 159044796 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3562] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.724395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAT CGCCCGCGCG GCGCTTTCTT TTCCTGCAAG GTCCCCACGG GCCCTTCTTC
ACGCAACTCG CCGCGATGCT GACCCGCGCA GGCGCGAGCT GTTGGCGTGT GGGATTCAAT
GCCGGGGATG CGCGGTTCTG GAAAGACAAG CCCCGCTACA TCCCGTTTAC CGGACCGCGC
GCCGACTGGC CGCAGACCTG CGCCCAACTG CTGCGCAGCA AGGCGATCAC GGACATCGTG
CTCTACGGCG ACACCCGGTG GATTCACCGC ACGGCAGTGG AAGCCGCCCG GCAGCATGGT
TGCCGCATCC ATGTGTTCGA GGAGGGCTAT CTGCGCCCCT CCTGGGTCAC CTATGAGCGG
GGCGGCTCCA ACGGGCACTC GCCTCTGATG GACACCACGA TTCCTGAAAT GACGCAGGCC
CTGCGCGGCC ATGCGCCCGA GTTGCCGGGT GCCCCGGCGC GCTGGGGCGA TATTCGCCAG
CACATGTTCT ATGGCGCGGT CTATCACTTT CATGTCCTGT TCCGGAATTC GGACTACACC
GCGTTCAAGC CCCACCGCGC CCTGACCGTG CGGCAGGAAT TCCTGCTCTA CCTGAAGATG
CTGCTGCGTC TGCCACTGAC CATGGTGGAA CGGGCGCTTG CAACGCGCCG GATCCGGCGA
GGTGGGTTCC CCTATCACCT TTTCCTGCTG CAACTCGAAC ATGACAGCGC ATTTCAGGCC
CACAGCCCGT TCGCATCCAT GACCGAGGTG CTCGCCGATG TCATCGGCGC CTTTGCGCGC
GCAGCCCCCG CGCATCACCA CCTCGTCTTC AAGGCGCATC CGCTCGAGGA TGGTCGCGCG
CCTCTGCCGG CGGTAATCAA GCGCCTGTCC CGCGAGACCG GCATCGCCGA TCGCGTGCAT
TACGTGAAGG GTGGCAAACT TGCCCGCCTG CTCGACCAGG CGCGCGCAGT TCTGACGGTC
AATTCCACGG CTGCACAGCA GGCCTTGTGG CGCGGCCTGC CGGTCAAGAC CCTGGGCCAG
GCAGTCTATG CCAAGCCGGA GCTTGTCTCG GCCCAACCCC TGGAGGCGTT TTTTGCGGAC
CCGATCCCGC CCGACATGCG CGCTTATCGC GACTTCCGGC ACTACCTGCT GGAAAGCAGC
CAAGTGGCCG GAGGGTTCTA CTCGGCGACC GGGCGGCAAC ACCTTCTACG GCAGGTCACG
GACATGGTGT TGTCCGACCA GGACCCCTAT GGAGCCCTCA AGATCGGCGC ACCACGGCGA
CGCTTCCCGA TACGCGTTGT GAAATAA
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| Protein sequence | MTGSPARRFL FLQGPHGPFF TQLAAMLTRA GASCWRVGFN AGDARFWKDK PRYIPFTGPR
ADWPQTCAQL LRSKAITDIV LYGDTRWIHR TAVEAARQHG CRIHVFEEGY LRPSWVTYER
GGSNGHSPLM DTTIPEMTQA LRGHAPELPG APARWGDIRQ HMFYGAVYHF HVLFRNSDYT
AFKPHRALTV RQEFLLYLKM LLRLPLTMVE RALATRRIRR GGFPYHLFLL QLEHDSAFQA
HSPFASMTEV LADVIGAFAR AAPAHHHLVF KAHPLEDGRA PLPAVIKRLS RETGIADRVH
YVKGGKLARL LDQARAVLTV NSTAAQQALW RGLPVKTLGQ AVYAKPELVS AQPLEAFFAD
PIPPDMRAYR DFRHYLLESS QVAGGFYSAT GRQHLLRQVT DMVLSDQDPY GALKIGAPRR
RFPIRVVK
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