| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2242 |
|---|
| Symbol | hisD3 |
|---|
| ID | 5713895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2365495 |
|---|
| End bp | 2366820 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641268164 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_001533579 |
|---|
| Protein GI | 159044785 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGT ATCTGAAGCG AGGAAAATCC GAAACCGAGC GCGCCGAGGA CGACGCGCGC
ACGCAGGCGA CCGTGACGGG CATCCTGCAA GACATCTCGA CCCGCGGGGA TGCCGCCGTG
CGGGATCTGA GCGAGAAGTT CGACGGTTAT ACGCCACAGG CCTTCCGGCT GTCGCCCTCC
GAAATCGAAG CAGCGATGCA GAAGGTCACC ACCCGCGAGA TGGGCGATAT CCGGTTCGCC
CAGGATCAAA TCCGCAACTT CGCGCAAGTC CAGCGCGCCA GCATGACTGA TGTGGAGGTT
GAAACCATTC CCGGTGTGAT CCTGGGCCAC AAGAACATCC CCGTGAACTC CGTGGGGTGT
TATGTGCCCG GGGGCAAGTT CCCCATGGTG GCCAGCGCCC ATATGTCGGT GATCACCGCC
AAGGTGGCTG GGGTGAAGCG CGTGGTCGCC TCCGCACCGC CCGTGAAGGG CGCGCCGCAC
CCGGCCATCG TGGCGGCCAT GCATGAGGGC GGGGCGGACG AGATCCTCGT GCTCGGCGGG
GTGCAGGCCG TCGGGGCCAT GGCTCTCGGA ACCGAGAGCA TTGCGCCCGT GGACATGCTC
GTGGGGCCGG GCAATGCCTT TGTCGCCGAA GCCAAGCGGC AGCTTTTCGG GCGCGTGGGA
ATTGATCTGT TTGCCGGGCC GACCGAGACA TGCGTGATCG CCGACGACAC CGTGGATGGG
GAAATGGTGG CGACCGACCT GCTTGGCCAG GCGGAGCATG GCTACAACTC TCCTGCCGTT
CTGATCACCT GCTCGCGTAA ACTGGCCGAG GATACGCTCT CCGAGATTGA CCGCCTTCTG
GCCATCCTGC CCACCGCCGA GACTGCGCGT GTCAGCTGGG AAGACTACGG CGAGGTGATC
CTTTGTACCG ACTATGACGA GATGCTGCGC GTCGCGGACG ACGTTGCGTC GGAACATGTG
CAGGTCATGA CGGACCGGGA TGACTGGTTC CTCGATAACA TGACCAACTA TGGCGCGCTC
TTCCTCGGCC CGCGCACCAA CGTGGCCAAT GGCGACAAGG TGATCGGTAC CAACCATACC
CTGCCGACGA AGAAGGCCGG GCGGTATACC GGGGGGCTTT GGGTCGGCAA GTTCCTCAAG
ACCCATAGCT ACCAGAAGGT GCTGACCGAC GAGGCGGCGA AGCTCGTGGG CGAGTATGGC
TCGCGGTTGT GCATGCTGGA AGGCTTCGTC GGTCATGCGG AACAATGCAA TGTCAGGGTG
CGCCGCTACG GCGGGATCAA CGTGCCCTAT GGCGAGGGCG CGCCCTACCG TGACGCCGCC
GAATAG
|
|---|
| Protein sequence | MAEYLKRGKS ETERAEDDAR TQATVTGILQ DISTRGDAAV RDLSEKFDGY TPQAFRLSPS
EIEAAMQKVT TREMGDIRFA QDQIRNFAQV QRASMTDVEV ETIPGVILGH KNIPVNSVGC
YVPGGKFPMV ASAHMSVITA KVAGVKRVVA SAPPVKGAPH PAIVAAMHEG GADEILVLGG
VQAVGAMALG TESIAPVDML VGPGNAFVAE AKRQLFGRVG IDLFAGPTET CVIADDTVDG
EMVATDLLGQ AEHGYNSPAV LITCSRKLAE DTLSEIDRLL AILPTAETAR VSWEDYGEVI
LCTDYDEMLR VADDVASEHV QVMTDRDDWF LDNMTNYGAL FLGPRTNVAN GDKVIGTNHT
LPTKKAGRYT GGLWVGKFLK THSYQKVLTD EAAKLVGEYG SRLCMLEGFV GHAEQCNVRV
RRYGGINVPY GEGAPYRDAA E
|
|---|
| |