Gene Dshi_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2185 
Symbol 
ID5713838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2312706 
End bp2313290 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID641268107 
Producthypothetical protein 
Protein accessionYP_001533522 
Protein GI159044728 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC TCCGCACCAC GGCACTGGCC GGTGTCTTCG CCCTTGGCGC CACGGCGGCC 
TTTGCCGATG CGCAGCGCTA CGTGCTCGAC GCCAGCCACA GCCAGATCGT CTTCAGCTAC
GATCACCTTG GCTATTCCAC GACTTATGGC ATGTTCTCGG GCTTCGAGGG CGAGATCCTG
TTCGACGCCG AGGATCCGGC GGCCTCGAGC GTCTCGGTCT CCATGCCCGT GCGGTCGATG
ATCACCGGCT GGGAAGAGCG GTTCACGCAT TTCATGACCG ACGAGTTCTT CGGCGCGGAT
GACGACGAGG ACATGGTCAG CTTCACGTCC ACGGCCATCG AGGTCACTGG CGAGGACACG
GCGCTGATCA CCGGGGATCT GACCCTGAAC GGGGTGACCA AATCCGTCGT TCTGGATGCA
AAGCTGAACC AGACCGGGAT GCACCCCATG GCCCAGAAGG AATGGGCCGG GTTCGACGCG
ACCACGACGC TGCTGCGTTC CGATTATAAT GTCGGGGCCT TCGCGCCGTT CGTCAGCGAC
GAGGTCGAGG TTCTGATCTC CATCGAGGCG ATGTTGGCCG ACTGA
 
Protein sequence
MTLLRTTALA GVFALGATAA FADAQRYVLD ASHSQIVFSY DHLGYSTTYG MFSGFEGEIL 
FDAEDPAASS VSVSMPVRSM ITGWEERFTH FMTDEFFGAD DDEDMVSFTS TAIEVTGEDT
ALITGDLTLN GVTKSVVLDA KLNQTGMHPM AQKEWAGFDA TTTLLRSDYN VGAFAPFVSD
EVEVLISIEA MLAD