| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2122 |
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| Symbol | |
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| ID | 5713118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2252722 |
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| End bp | 2253567 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641268044 |
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| Product | putative spermidine/putrescine transport system permease protein |
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| Protein accession | YP_001533459 |
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| Protein GI | 159044665 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC GCCCGACATT CTTTTCCCTG ATCCTGTCTC TGCCACTCCT GATCTGGCAG
CTGACCTTCT TTCTGTTTCC GCTTCTGTTT CTGGTCGCGA TCAGCTTCTG GACAGTGCGC
AATTTCCAGA TGACGCCGGA TCTGAATTTC GCCAACTGGG AGCGGATCCT GACGCGCGGC
GTCTTCTGGG ACGCCTATTT CCGCACGATG GTCCTGGCCA CGACCGCGGC CGTGATCACC
AGCGCGATCG CCTTTCCCGC ATCCTACGCG ATCTCCTTCA AGATGAGCGA GAAGGCCAAG
CGGTGGATGA TCTTCATCCT GATCATCCCG TTCTTCACCA GCTACCTGGT GCGGGTCTAT
TCGTTGCAGG TGTTCCTGTC CGACGCGGGC ATCGTGAACG CGGCGCTGGG CTATCTCGGC
CTCGGACCCT TCACCATGCT GAACAACGCC TTCGGCATTC TCGTCGGCAT GGTCACACTG
ACCCTGCCGC TCGTGATCCT GTTGCAGACC TTCAGCCTGA ATTTCGTCAA CCGGGACCTG
ATCGAAGCCG CGCACAACCT GCGGTGCGGG CGGCTGCGCA CGGTGTTCGC GGTGATCGTG
CCCTCGGCCA AGGTCGGCCT CGTGATCGCG GCGCTCTTTG CCTTCATCCT CAGCTTCGGG
GATTTCGTCA GCCCGCTTTA CCTCGGCGGC GGCAACCCTC CGACGCTGTC GATCATGATC
ACCGACATCA CCAAGTCCGG ACAACAATGG CCGCGCGCCG CTGTGGTCGC GATCATGATG
ATCGCCACCC TGCTGACCGT TGCCTTCGCG GCGATCACAT ACGCCTACAA GGAGCGGGGC
AAATAA
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| Protein sequence | MTKRPTFFSL ILSLPLLIWQ LTFFLFPLLF LVAISFWTVR NFQMTPDLNF ANWERILTRG
VFWDAYFRTM VLATTAAVIT SAIAFPASYA ISFKMSEKAK RWMIFILIIP FFTSYLVRVY
SLQVFLSDAG IVNAALGYLG LGPFTMLNNA FGILVGMVTL TLPLVILLQT FSLNFVNRDL
IEAAHNLRCG RLRTVFAVIV PSAKVGLVIA ALFAFILSFG DFVSPLYLGG GNPPTLSIMI
TDITKSGQQW PRAAVVAIMM IATLLTVAFA AITYAYKERG K
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