| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2118 |
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| Symbol | |
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| ID | 5713114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2248012 |
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| End bp | 2248998 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268040 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001533455 |
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| Protein GI | 159044661 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA AACCAGCCTT GAAGGTCGGC TTCATCCTGA CGCGGCAGTT CACCCTGTCG
GCGTTCGCGA ATTTCGTCGA TGTGCTGCGG CTCGCGGCCG ATGAGGGCGA CCGCTCCCGG
CCGATCCGGT GTTCGTGGAA GGTTCTGTCG GCGACCATGA ACCCGGTGGT GTCGAGCTGC
GGGATTCCGG TGCAGCCCGA TCAGCGTCTC GGCGATCCGC GCGCCTTTGA CTACATGGTC
GTTGTGGGCG GACTGATCCC GGCGATCCAG GATCTGAACC CCGACTACAT CGCCTATCTC
AAGCGCACGG CCGAGGCCAA TGTCCCAATC GTCGGGGTCT GCACGGGGGC GTTCATCCTG
CACCAGGCGG GGCTGATGGA GGGCTATCGC TGCTGCGTGA GCTGGTTTCA TCACAACGAT
TTTCTCGAAC AGTTCGAGGG GCTGATCCCG GTATCGGACC AGATCTTCGT CGTCGACCGC
GATCGGCTGA CCTGTTCCGG GGGGGCAAGC TCGGCCCATC TCGCCGCTTT CCTGGTGGAC
CGCCATATCG GGCAGGCCGC CGCGCGCAAG AGCCTCAACA TCATGATCAT CGACGAGGCG
CAGACCCCGG AGAACCCGCA GCCGGGGCTG CCGCTGGAAT TCAGCACCTC GGACAAGCTG
GTCCGCAAGG CGCTGCTTCT GATGCGGCAG AACGTGGCGA CGCCGTTGAC CGTGGATCAG
CTGTCAAAGC GTCTGGGCAT CAGCCGTCGC AAGTTGCAAC GCCATTTCGG CGAGGCGCTG
CAGCTGTCAC CTGCGGAGGC CGGTATCGCG GTTCGGCTGA ATGTCGCGCG CCAGTTGCTG
CGGCGCACCG ACCAGTCCGT CACGCATATC GCCGCCGCGA CGGGGTTTTG CGATGCGTCC
CATTTCAGCA AGGTGTTCCG GGCCCGCGAG GGTGTGCCCC CCGAAACCTG GCGGCGCCAG
GCGGTCCCGG AGGACGCCGA CGCCTGA
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| Protein sequence | MSTKPALKVG FILTRQFTLS AFANFVDVLR LAADEGDRSR PIRCSWKVLS ATMNPVVSSC
GIPVQPDQRL GDPRAFDYMV VVGGLIPAIQ DLNPDYIAYL KRTAEANVPI VGVCTGAFIL
HQAGLMEGYR CCVSWFHHND FLEQFEGLIP VSDQIFVVDR DRLTCSGGAS SAHLAAFLVD
RHIGQAAARK SLNIMIIDEA QTPENPQPGL PLEFSTSDKL VRKALLLMRQ NVATPLTVDQ
LSKRLGISRR KLQRHFGEAL QLSPAEAGIA VRLNVARQLL RRTDQSVTHI AAATGFCDAS
HFSKVFRARE GVPPETWRRQ AVPEDADA
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