Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2092 |
Symbol | |
ID | 5713087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2216299 |
End bp | 2217084 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641268014 |
Product | hypothetical protein |
Protein accession | YP_001533430 |
Protein GI | 159044636 |
COG category | [R] General function prediction only |
COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACC ACAGCAGCCC CGCAACCGAC CCCGTGATCG AGGCCGCCCC GGCCCGCGCC GTGATCCGCG TGACCGGCCG CGACGCCCGC GATTTCCTGC AGGGCATGGT CACCAACGAT CTGGCCAAGG GGCTGGAGCA CGGCCTCGTC TACGCCGCTC TGCTCAGCCC CCAGGGCAAG TACCTGGCGG ATTTTTTCGT GCTCGCGCAG GATGACGCCC TGCTGCTCGA CGCCCCCGAA GCGCTGGCGC CCGACCTGCT CAAACGGCTG ACCATGTTCA AGCTGCGCGC CGACGTCACG CTTGAGAAAA CCGAGATGCC CGTCGCCCGC GGCCTCGGCC CCGCGCCCGA AGGCGCCTTG GCGGACCCGC GCGACCCGGC CCTCGGCTGG CGCCTCTACG GTGTGGCGGG CGGGCCCGAG GTGACGGATT GGGACGCGCT CCGCGTCGCC CATCTTGTGC CGGAGGCCGG GACCGAACTG ATCCCAAATG ACAGCTACAT CCTCGAGATG GGGTTCGAGC GTCTGCACGG CGTCGATTTC AAGAAGGGCT GCTATGTCGG CCAGGAGGTC GTCGCCCGGA TGAAGCACAA GACCGAGCTG CGCAAGGGCC TCGCCCGGGT CGCGGTCGCG GGCGAGGCCG CTCCGGGCGA CGAAATTACC GCAGGCGGCA AACCCGTCGG CGTGCTCGGG ACCCGCAGCG GCGACCGGGC GCTGGCCTAC CTGCGCTTCG ACCGCGCCAC CGGACCGATG GAGGCCGGGG CCGCCCGCGT CACCTGGACG CCCTGA
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Protein sequence | MPDHSSPATD PVIEAAPARA VIRVTGRDAR DFLQGMVTND LAKGLEHGLV YAALLSPQGK YLADFFVLAQ DDALLLDAPE ALAPDLLKRL TMFKLRADVT LEKTEMPVAR GLGPAPEGAL ADPRDPALGW RLYGVAGGPE VTDWDALRVA HLVPEAGTEL IPNDSYILEM GFERLHGVDF KKGCYVGQEV VARMKHKTEL RKGLARVAVA GEAAPGDEIT AGGKPVGVLG TRSGDRALAY LRFDRATGPM EAGAARVTWT P
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