Gene Dshi_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2064 
Symbol 
ID5713059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2185839 
End bp2186339 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content73% 
IMG OID641267986 
Producthypothetical protein 
Protein accessionYP_001533402 
Protein GI159044608 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.13474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATTGC GGCAGGAAGA ACCAGGCGAT TGGTGGGAGG TGGAGGCGCT CTTCGATCTG 
TGCTTCGCGC CCGGTCGCGA GGCGCTGTCA TCCTACCGGC TGCGCGACGG GGTTCCGCCA
GTGGGCGCGC TGTGCCTGGT GGCGCCGAAC GAGGACAATG CGCTGGGCGG GGTCGGTGGC
GCGATCCGGT TCTGGCCGAT CCGCGTGGGT GGGGCGGAGG CGCTGCTGCT CGGTCCGGTG
GCGGTGCACC CGACCCGGCA GGGGGAGGGG TTGGGCGCGC TGCTGATCCA GGCGGGTCTG
GAGAAGGCCG CGGCACTGGG CTGGACGCGG GTCCTGCTGG TGGGCGATGC GCCCTATTAC
GGCCGGTTCG GCTTTGTCCG GGCCGAGGGG ATCGAGATGC CCCCGCCGAC CAATCCCGAC
CGGGTGCTGG TCCAGGCGCT GAGCGCGGGC GCGTGGGACG ATGTGCGCGG CGAGGTCACG
CCCGCGACCC CGGCGCCGTA G
 
Protein sequence
MQLRQEEPGD WWEVEALFDL CFAPGREALS SYRLRDGVPP VGALCLVAPN EDNALGGVGG 
AIRFWPIRVG GAEALLLGPV AVHPTRQGEG LGALLIQAGL EKAAALGWTR VLLVGDAPYY
GRFGFVRAEG IEMPPPTNPD RVLVQALSAG AWDDVRGEVT PATPAP