Gene Dshi_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2059 
Symbol 
ID5713054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2177212 
End bp2177808 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID641267981 
Producthypothetical protein 
Protein accessionYP_001533397 
Protein GI159044603 
COG category[R] General function prediction only 
COG ID[COG0645] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.527237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC GCACCCTTAT TGATGATGCC CTGTCGGACC CTGGGGTTCT GATTGTTTTC 
GGCGGCTTGC CGGGAGCGGG CAAATCGACC ATTGCCGAGG CCCTGGCGGC GCAGATCGGC
GCGGTGCACC TGGTCATCGA CCGGATCGAG GCCCCGCTGA AAGCACGGCT CGGGGCCGAT
ATCGGGCCAC TGGGCTACAA CGTGGCCTAC CAGGTGGCGA CCTCCAACCT CGATCTCGGC
CATGTGGTGA TCGCCGATTG CGTCAACCCG ATCGCCATGA CACGCAACGC CTGGATGAGC
GTTGCGATGG GCTGTCAGGC CAAGATGGTG CAGGTCAATA TCCAGTGCTC CGATCTTCAG
GAGCATCGCC GCCGGGTGGA GAAACGCCTG ACCGAACGTC CACGGCAAGG CCTGCCCGAC
TGGCAGAGCG TACAGGCGCG GCAGATCGAC GAGTGGCCCG AGGCCGACCT GACCATCGAT
ACATACATGC GCACGCCCGA CGAGTCAGTT TCCGCCATCG TGAGCGCCCT GCGCCGCCTG
GCGCCCAGCC GCTTCGGCGC CGACCCGTTC GCTCGGGGGG TCATGGGGTC TGGCTGA
 
Protein sequence
MDKRTLIDDA LSDPGVLIVF GGLPGAGKST IAEALAAQIG AVHLVIDRIE APLKARLGAD 
IGPLGYNVAY QVATSNLDLG HVVIADCVNP IAMTRNAWMS VAMGCQAKMV QVNIQCSDLQ
EHRRRVEKRL TERPRQGLPD WQSVQARQID EWPEADLTID TYMRTPDESV SAIVSALRRL
APSRFGADPF ARGVMGSG