| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2042 |
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| Symbol | tpa |
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| ID | 5713037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2160601 |
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| End bp | 2161983 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267965 |
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| Product | taurin--pyruvate aminotransferase |
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| Protein accession | YP_001533381 |
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| Protein GI | 159044587 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.291781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC ATGTTGCTCC CAATGACCTC AGCCATGTGA TCGAGGCGGA TCGTGCCCAT
CAGTGGCACC ATCTGATCAA CCACAAGCCC TTCGAGACGA CCGATCCGCG GATCATCGTC
GAGGGCAAGG GAATGCGCGT CTGGGATGCC CTGGGCAAGG AACATCTGGA TGCGGTCTCC
GGCGGGCTCT GGACCGTCAA CGTGGGCTAT GGGCGGGAGC GGATCGCGAA TGCCGTGCGC
GACCAGCTCA TGCAGATGTG CTTTTTCTCG AATTCGCTAG GCACGATCCC GGGGGCGATC
TTCTCGGAAA TGCTGATCGA CAAGATGCCG GGGATGAGCC GGGTCTATTA TGCCAGCTCC
GGCTCGGAGG CGAACGAAAA GGCGTTCAAG ATGGTGCGCC AGATTGCGCA CAAGGTCCAT
GGCGGGCGCA AGACCAAGAT CCTGTATCGC GAGCGGGACT ATCACGGCTC GACCCTGGCC
ACGATGTCGG CGGGTGGACA GTGGGAGCGC AAGGCGCAAT ACGGCCCCTT CGCGCCCGAC
TTCGTCGAGG TGCCTCATTG CCTGGAATAT CGCGCCCAGT GGGAGGGTGA GAACTATGGC
GAGCGCGCGG CTGACGCGAT CGAGGAGGTG ATCCTGCGCG AAGGCCCGGA CACGGTCGGC
GCGCTCTGCC TGGAGCCGGT GACGGCCGGG GGCGGTGTGA TCACCCCGCC CGAGGGCTAC
TGGCCGCGCG TCCAGGAGAT CTGCCGCAAG TACGATGTGC TGTTGCATAT CGACGAGGTG
GTTTGCGGGC TGGGCCGGAC GGGCAAGTGG TTTGGCTACC AGCATTACGG GATCGAGCCG
GATTTCGTGA CCATGGCCAA GGGCGTCGCC TCGGGCTACG CTGCGATTTC GTGCATGGTC
ACGACCGAGC GCGTGTTCGA GATGTTCAAA TCCGAGCCCG GCGCGCCGCT CGATTATTTC
CGCGATATCT CGACCTTCGG GGGGTGTACG GCGGGACCGG CGGCCGCGAT CGAGAACATG
AAGATCATCG AGGAAGAGGA TCTGCTGGGC AACACCGACC GGATGCATGA CCAACTGATG
GGCAACCTCG CCGGGCTGAT GGAGAAGCAT CGGGTGATCG GGGACATCCG CGGCAAGGGC
CTGTTCTGCG GGGCCGAACT TGTGGCGGAC CGGACCACGA AGGAGCCCGC GCCCGAGGCC
CTGGTGCAGG CGGTCGTGGC CGATTGCATG GCCCAAGGCG TCATCATCGG GGCGACAAAC
CGCTCGCTGC CGGGGTACAA CAACACGTTG TGTTTCAGCC CCGCACTGAT CGCCACCGCG
GACGATATCG ACCAGATCAC CGACGCCGTC GACGGGGCGC TGACCCGGGT GTTCGGCGCA
TGA
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| Protein sequence | MTTHVAPNDL SHVIEADRAH QWHHLINHKP FETTDPRIIV EGKGMRVWDA LGKEHLDAVS
GGLWTVNVGY GRERIANAVR DQLMQMCFFS NSLGTIPGAI FSEMLIDKMP GMSRVYYASS
GSEANEKAFK MVRQIAHKVH GGRKTKILYR ERDYHGSTLA TMSAGGQWER KAQYGPFAPD
FVEVPHCLEY RAQWEGENYG ERAADAIEEV ILREGPDTVG ALCLEPVTAG GGVITPPEGY
WPRVQEICRK YDVLLHIDEV VCGLGRTGKW FGYQHYGIEP DFVTMAKGVA SGYAAISCMV
TTERVFEMFK SEPGAPLDYF RDISTFGGCT AGPAAAIENM KIIEEEDLLG NTDRMHDQLM
GNLAGLMEKH RVIGDIRGKG LFCGAELVAD RTTKEPAPEA LVQAVVADCM AQGVIIGATN
RSLPGYNNTL CFSPALIATA DDIDQITDAV DGALTRVFGA
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