| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2039 |
|---|
| Symbol | |
|---|
| ID | 5713034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2158316 |
|---|
| End bp | 2159335 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641267963 |
|---|
| Product | malate/L-lactate dehydrogenase family protein |
|---|
| Protein accession | YP_001533379 |
|---|
| Protein GI | 159044585 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.308465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.10893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACATGT CCGAGACCGA AACCCTTTCC CTGCCCGACG CGCGCGACCT TCTGTTCCGG
GCCTTTACGG CCAACGGCGT GCCGGAAGGC GCTGCGCGCA GCACCGCCGA CGCGCTGGTC
GCGGCCGAGG CCGAGGGCCA GGTGGGCCAC GGGTTTTCGC GGCTGGAAGA TTACGTGGCC
CAGGCCCGCA GCGGCAAGAT CGTCGCCGGG GCCGAGGTGA CGATCACCCG CCCTGCCCCG
ACCACACTGC TGGTGGATGC CGGCCACGGG TTCGCCTATC CGGCGCTGGA GCGTGCCATT
GACGAAGGCA TCGCCGTCGC GCGGGAACTT GGCACCGCCG CCATCGCCGT GACCCGCTCG
CACCATTGCG GCGCGCTGTC GATCCATGTG GAGCGGGCGG CAAAAGCCGG GCTGGTGGCG
ATGATGGTGG TCAACGCCCC CGCCGCGATT GCCCCCTGGG GCGGCAAGAC CCCGCTTTTC
GGCACCAACC CCATCGCCTT TGCCACGCCC AGGGCCGGGA GCGCGCCGTT GGTCATCGAC
CTGTCGCTGT CGAAGGTGGC CCGCGGCAAG GTGATGAATG CCAAGAAGGC GGGCAAGCCG
ATCCCCGAAG GCTGGGCGCT CGATGCCGCG GGCAATCCGA CCACGGATGC CGAGGCAGCG
CTCGGCGGCA CCATGGTGCC CATCGGCGAG GCCAAGGGCA CCGCGCTGGC GCTGATGGTC
GAGATCCTGT CCGCGGTGAT GACCGGTGCC GCGCTGAGCA CCGAGGCCGG GTCGTTCTTT
TCCGCTGACG GCCCGCCCCC TGGGGTCGGC CAGTTTCTGA CGCTCTGGCG TCCGCCCGAG
GGGGCGGAGG CGTTCACTGC CCGGCTCGCC CCGCTGCTGG CCCAGATCGA GACGATGGAG
GGCGCCCGCC TGCCGGGCAC ACGCCGTCTG GCCGCCCTGA ACGCCGCGCA GGCACACGGC
ATCGCGGTGC CGCGCGCCTA TCTCGACGGC GCCCGCCGTC TTGCCGCCAC CCATCCCTGA
|
|---|
| Protein sequence | MYMSETETLS LPDARDLLFR AFTANGVPEG AARSTADALV AAEAEGQVGH GFSRLEDYVA
QARSGKIVAG AEVTITRPAP TTLLVDAGHG FAYPALERAI DEGIAVAREL GTAAIAVTRS
HHCGALSIHV ERAAKAGLVA MMVVNAPAAI APWGGKTPLF GTNPIAFATP RAGSAPLVID
LSLSKVARGK VMNAKKAGKP IPEGWALDAA GNPTTDAEAA LGGTMVPIGE AKGTALALMV
EILSAVMTGA ALSTEAGSFF SADGPPPGVG QFLTLWRPPE GAEAFTARLA PLLAQIETME
GARLPGTRRL AALNAAQAHG IAVPRAYLDG ARRLAATHP
|
|---|
| |