| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2029 |
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| Symbol | |
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| ID | 5713024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2149164 |
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| End bp | 2150222 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267953 |
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| Product | HTH-type transcriptional repressor |
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| Protein accession | YP_001533369 |
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| Protein GI | 159044575 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.169196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGACA GGACGACAAA CAGGCGCGTG GCACGCAAAC CCGCCACCCC CTCGCCGACC
CTCCAGGACG TGGCGCAGGC GGCGGGCGTG TCCACGGCGA CCGTGTCGCG CTGCCTGAAC
TCGCCGGAAC TGGTGGTCGA GCAGACCCGG GAGCGCGTGC TGGCCGTGGT GCAGGAGCTT
GGCTATGCGC CCAACTTCGG GGCACGGGCG CTGGCGGCGA AACGCACCAA TACCATCGGC
GCGATCATTC CCACCATGGA AAACGCGATC TTCGCACGGG GCCTGCAGGC CTTTCAGGAA
GAATTGGCCC GCCACGGGCT GACCCTTCTC GTGGCGTCGT CCTCCTACAG TCCCAAGCTG
GAGGAGGAAC AGATCCGCAC GTTGCTGGCG CGCGGGGCGG ATGCGCTGCT GCTGATCGGG
TTCGAGCGTT CGGCGCGGGC TTACGAGCTG TTGCAGCAGC GCGGCGTACC TTACGTCATC
GCCTGGGCCT ATAGCGCGGG CAGCGACCAC CATGCCATCG GCTTCGACAA CCGCGCGGCG
ATGCGGGCGC TGGCGCGGCA GGTCTTCGGG CTGGGTCACC GGGATGTGGC GATCATCGCG
GCCCCGATGG ACAGCAACGA CCGGGCGCGG GAGCGGGTGC TGGGCATCTG GGACGCGGCT
GCCGAGGTCG GGCTGGATCG GGACGCCCTC ACCTTGGTCC AGACACCCTA CTCGATCGAG
AATGGCGCGC GGGTCATGGC AGAGATCCTC GCAGGGCCGC GTCAGCCCAC GGCGGTGATG
TGCGGTAATG ACGTTCTGGC CGTGGGCGCC ATGGGGGCGG CCCGCGCCGC CGGGCTGTCG
GTGCCCGGGG ACCTGTCGAT CACCGGGTTC GACGATATCG AGATCGCCGG CATCGTGACG
CCGGGCCTGA CCACGGTCCA TGTCCCGCAC CGCCAGATGG GGATCGAGGC GGCCCGCGTC
CTTGCCACGT TGCTCTCCGG CGGTGCCCCT CCGGTGCCGC TGCTTCTGGA GACGCAGATC
ATCTCGCGGG CTTCTCTCGG ACCCGTGTCC GGGACTTGA
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| Protein sequence | MVDRTTNRRV ARKPATPSPT LQDVAQAAGV STATVSRCLN SPELVVEQTR ERVLAVVQEL
GYAPNFGARA LAAKRTNTIG AIIPTMENAI FARGLQAFQE ELARHGLTLL VASSSYSPKL
EEEQIRTLLA RGADALLLIG FERSARAYEL LQQRGVPYVI AWAYSAGSDH HAIGFDNRAA
MRALARQVFG LGHRDVAIIA APMDSNDRAR ERVLGIWDAA AEVGLDRDAL TLVQTPYSIE
NGARVMAEIL AGPRQPTAVM CGNDVLAVGA MGAARAAGLS VPGDLSITGF DDIEIAGIVT
PGLTTVHVPH RQMGIEAARV LATLLSGGAP PVPLLLETQI ISRASLGPVS GT
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