| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2025 |
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| Symbol | |
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| ID | 5713020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2145522 |
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| End bp | 2146214 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267949 |
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| Product | conserved hypothetical protein DUF1498 |
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| Protein accession | YP_001533365 |
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| Protein GI | 159044571 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3822] ABC-type sugar transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0403362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT CCGAAATCAA CGCCATCATG GCCGAGGCGG ATGCCCTGAT CCGCCGCCAC
GGGTTCGTTC TGCCGCCCTT CGCGCGCTGG AGCCCCGCGG AATTCGCCGC CCGCGCGCCC
GAGGCCCGCC ATGTCATCGA CGCCCGCTGC GGCTGGGACA TCACCGATTA CGGCGCGGGG
CGGTTCGACG AGATGGGGCT GTTCCTGTTC ACCCTGCGCA ACGGGCGGCT TGCGGACCTG
CAGCGCGGTG GTGGCATGTG CTACGCCGAG AAGCTGCTGA TCTCGCGCCG CGACCAGCTC
TGCCCGATGC ACACCCATGT GATCAAGGCC GAGGATATCA TCAATCGCGG CGGGGCCACG
CTGGTGGTCG AGCTCTACGG CTCCGACGAC GCGGGCAACT TCGCCGAGGA TCGCGGCGGC
ACCGTGGCCT GCGATGGCAT CGCGCGCCCC TACGCCCCCG GCGACAAGCT GCGCCTCGCG
CCGGGCGAGA GCGTGACGCT GATGCCCGGG GACTGGCACG CCTTCTGGGG GGAGGGGGGC
GACGTGTTGA TCGGCGAGGT CTCCACCGTC AACGACGACG AGACCGACAA TATCTTCCGC
GATCCCATCG GGCGGTTCGC CGAGATCGAG GAGGACGTCG CGCCCACGCA CCTGCTGGTC
AGCGATTACG CCACACACCT GCCGCGGAGC TGA
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| Protein sequence | MKRSEINAIM AEADALIRRH GFVLPPFARW SPAEFAARAP EARHVIDARC GWDITDYGAG
RFDEMGLFLF TLRNGRLADL QRGGGMCYAE KLLISRRDQL CPMHTHVIKA EDIINRGGAT
LVVELYGSDD AGNFAEDRGG TVACDGIARP YAPGDKLRLA PGESVTLMPG DWHAFWGEGG
DVLIGEVSTV NDDETDNIFR DPIGRFAEIE EDVAPTHLLV SDYATHLPRS
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