| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2008 |
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| Symbol | |
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| ID | 5713003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2127799 |
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| End bp | 2128614 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267932 |
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| Product | putative glycerol-3-phosphate regulon repressor |
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| Protein accession | YP_001533348 |
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| Protein GI | 159044554 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.695366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0287026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACACG CGGTCTCTGG CACTGGGTGC GAAAATCGGC GCAGCGTGCC GCGACGACTG
AAGAAGTCGG AACGGCAACG CCGCATCCTG CTGGAGCTGA AGTTGCATCC GCATGTGCGG
GTCAGCGACC TCGCCCGGCG CTTCGATGTA TCTACCGAAA CCCTGCGCCG CGATCTCGAC
AGCCTGAGCC ACGAGGGGCT GATCAGCCGC GCCTATGGCG GGGCCTCGGT GCCGACGCGG
GGCACATATC CGGACCTGAC CGAGCGCTCC GGCGCCCGCG CGGCCGAGCG GGCCCGCATC
GCGCAGGCCG CGGCGGCCCT GGTCCATCCC GGCGAGACCC TGATGATCGA CAGCGGCGCG
ACCATGATCG AGGTGGCGCG CGCGCTGGCC TGGCGTGGCA CGCCCTGCAC GGTAATCACC
AACAGCCTGC CGGTGGCGAT GACCCTCGGC GAGGGCGCGG CGGAGGTGAT CCTGGCGCCC
GGCGCCTACC AGGCAGCGGA ATCTGCGGTC ACCGGCACGG ACACGGTCGC CTTCCTCAAC
GGCTTCCGCG TGGATCGCTG CATGATCGGC GCGGCCGGGC TGACCGGCGA GGGGCCGTTC
GAGACCGTGC GCGGGTTCAC GGCGGTGAAA CGGGCGATGC TGTCACGGAG CTGTCACACA
CATCTGGTGT TGGATAGCGG CAAGTTCGGG CGGACCGGAC TGAACCATGT GGGGGCACTG
GATATGCTGT CCTCGGTGGT CGTGGAGACG CGACCCCCGG CGGATCTGGC CAGTGCGCTG
CACCGGGCCG GGGTCGATGT GCTGATCGCG GACTGA
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| Protein sequence | MAHAVSGTGC ENRRSVPRRL KKSERQRRIL LELKLHPHVR VSDLARRFDV STETLRRDLD
SLSHEGLISR AYGGASVPTR GTYPDLTERS GARAAERARI AQAAAALVHP GETLMIDSGA
TMIEVARALA WRGTPCTVIT NSLPVAMTLG EGAAEVILAP GAYQAAESAV TGTDTVAFLN
GFRVDRCMIG AAGLTGEGPF ETVRGFTAVK RAMLSRSCHT HLVLDSGKFG RTGLNHVGAL
DMLSSVVVET RPPADLASAL HRAGVDVLIA D
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