| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1991 |
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| Symbol | |
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| ID | 5712986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2106982 |
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| End bp | 2108817 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267915 |
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| Product | putative multidrug export ATP-binding/permease protein |
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| Protein accession | YP_001533331 |
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| Protein GI | 159044537 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0980803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.606679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGGT CCGGCAGCCG TCCGTCCTCG TTGGCGGAGA CCGCCCCCGG CTTGCGCCGG
GTGTTGCGGC GACTGGCCCC GTTCATGCGC GACGAGCGTC CCCTGATCGC GGGCGGGGCG
CTGGCCATGC TCGCGGCCGT CTTCGCCAAG CTGGCCGAGC CCTGGCCGCT GAAGTTCGTG
ATCGACATGT TCGTGCCCGG GCGGGGCGGA ACGGAGCCGG GGATGCCCTT CGGGCTGACC
GATCCGATCA TGCTCCTGGT GCTGTGTGCG CTGTCCATAG TCCTGGTGAT GGGCTTGCGC
GCCACGTTCG AGTTCACCGC ACGGGTGACC TTCGCGCTCG CCGGGGCGCG GGTTCTGGCG
AAGGTCCGCG CGACGCTGTT CGAGCATCTG CAACGGTTGC CCGTGGCGTT TCACCAGAAA
TCCCGCCCCG GTGACCTGAC CCTGCGGCTG ATTTCCGATG TGGGCATGCT CAAGGAGACC
ACCGTCACCG CCGCCTTGCC GCTGGCCGTG AATGCGCTGG TGCTGGTCGG CATGATCGCC
GTGATGCTCT GGATCGATTG GCAGCTTGCC CTGATCGCGC TGTCACCCTT GCCCGTGCTG
TGGCTGATGA CGATGCGGAT CGGGCGGCGT ATCCAGTCGG TCAGCCGCAA GACCCGGAAA
ACCGAAGGGG CCATGGCGGC CTCCGCATCC GAGGCGATGT CGAACGTGGC CATCGTCCAG
GCGCTCGGCC TCGAGAAAGC GATGAGCAAG GATTTTCTCG GCGACAACGC CGCTGAGTTG
AAACAGGGCG TGCAGTCCAA GCGGCTGACC GCGGGGCTGG AACGCCGGGT CGATATCCTG
GTGGGTGTCG GCATCGGCCT GGTGCTGTTG TTCGGGGGGC TGTCCATCCT CGACGGGCGC
ACCACGCCCG GGGATCTGAT CGTCTTTCTG ACCTACCTCA AGAACACGTT CAAACCCGTG
CGCGACTACG CCAAATATGC CGCCCGCCTC GCCAAGGCGA CCGCGGCCGG GGAGCGGGTC
ATCGCGTTGC TCGACGAGGA CACGAAGCTG ACCAGCCTCG CGACGCCCGT CAAACTGCCC
GAAACCCAGG GGGGGATCGC GTTCGAAAAC GTGTCTCTGA ACCTGGGCGG CTCCGAGATC
CTGAAGGATA TCTCGATCTC GATCCGCGCA GGCGAGCGGG TTGCCATCAC CGGCCCGTCT
GGGTCAGGCA AATCGACGCT CCTGTCCCTG GCGATGCGCT TGCAGGATCC CGATGCGGGG
GCCGTGCGCC TCGACGGGCG GGACCTGCGG GCCCTGGCGG TGGAGGATGT TCGCGACAGC
TTTGCCTTCG TGCCGCAGGA TCCGGTGCTG TTTCATGCCA GCATCGCGCG CAATCTGGGC
ATTGCCGCGC GTCACGAACC GACCCCAGAC GAGATCATCG CGGCCGCGCA GCTTGCGGGG
GCCCATGACT TCATCCTGTC GCAACCCCAG GGCTATGACA CGGTGCTGGC GGAACGCGGC
AGCACCCTGT CGGGCGGCCA GCGCCAGCGC CTGTCCTTCA CGCGCGCGGC TCTCAGGAAC
GCGCCGATCT TCCTGCTGGA CGAGCCGACC ACCGGTCTGG ATGCGACCAC TCAGGCGAAC
CTGGCAGACG CGATCTGGCA GCTGACCGAG AACCGCACGC TTTTGATGGT GACCCATGAT
CTCCATCTCG CGGCCCGGGC GGATCGGGTG ATCTGCCTGG AGGGCGGGCG GATCGTCGCG
AACGGTCGCC ACGAGGACGT TCTGGCGCAA GGCGGGCTCT ATGCCAAGCT CTGGGCCGAG
CAGATGCAGA CGGGGGTCGC CCATGCCGCA GAATGA
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| Protein sequence | MARSGSRPSS LAETAPGLRR VLRRLAPFMR DERPLIAGGA LAMLAAVFAK LAEPWPLKFV
IDMFVPGRGG TEPGMPFGLT DPIMLLVLCA LSIVLVMGLR ATFEFTARVT FALAGARVLA
KVRATLFEHL QRLPVAFHQK SRPGDLTLRL ISDVGMLKET TVTAALPLAV NALVLVGMIA
VMLWIDWQLA LIALSPLPVL WLMTMRIGRR IQSVSRKTRK TEGAMAASAS EAMSNVAIVQ
ALGLEKAMSK DFLGDNAAEL KQGVQSKRLT AGLERRVDIL VGVGIGLVLL FGGLSILDGR
TTPGDLIVFL TYLKNTFKPV RDYAKYAARL AKATAAGERV IALLDEDTKL TSLATPVKLP
ETQGGIAFEN VSLNLGGSEI LKDISISIRA GERVAITGPS GSGKSTLLSL AMRLQDPDAG
AVRLDGRDLR ALAVEDVRDS FAFVPQDPVL FHASIARNLG IAARHEPTPD EIIAAAQLAG
AHDFILSQPQ GYDTVLAERG STLSGGQRQR LSFTRAALRN APIFLLDEPT TGLDATTQAN
LADAIWQLTE NRTLLMVTHD LHLAARADRV ICLEGGRIVA NGRHEDVLAQ GGLYAKLWAE
QMQTGVAHAA E
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