| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1990 |
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| Symbol | |
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| ID | 5712985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2104752 |
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| End bp | 2106995 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267914 |
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| Product | protein kinase-like protein |
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| Protein accession | YP_001533330 |
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| Protein GI | 159044536 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.533031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA ATGATGCGCT GATCGCGCGG GATCCGGGCT TGCCGGGGCT TGCGCTGCTG
CTGGACCGCT CGGCGCTGGA GGCCGGTCTC GGCGCGCCCA TCGCGGCGCT GGGGTCGCTG
CGCTACAAGC CCGGCACCAG CTGCACCCGC GCCGTGCGCC TGGCGGATGG TCGCCATCTG
TGGCTCAAGG CGCTGACCCG CGACAGGCAT GGCCAGGTGC TTGCGCGCGG CCAGGACCTT
GCGCCCCAAG CGTTGCGCGA CCGGCATGTG GTGGCGCAAT CCCCCGCCGC GGACCGGGAC
ATTCCCGGTC TGAAACGGCT CTGGCCCGAA CAAAGCAGGC CGGCGGAGCT GGCGCGCCTG
CTGGGCGATC ATCCCCTGTC CCGGGCCGTG CTGCACCCCC TGAGCCACCG TCCGACCCGC
CGTCTGGTCG CGCGCCTCGA CGCGGGCGGC ACACGGGCGT TCCTGAAGGC TTACACGCGC
AAGGCCCATG CACAGGCATT GTCGGGCATC CTGCTGGCCG CCACGCTCGG GCATGGGCGC
GTTCTCGCGG CCTGCGCCGA GCGTGGGCTG ATCGTGTCCG ACTGGATCGA CGGGCGCAGC
CTGTGCCCGG CCAACGATGC GGCGCTCGAC CCGCACGCCT TCCGCCAGGC CGGAGCGGCC
CTTGCCACCG CCCATCGCGC CGGCCTTCGG ACGCCGTTTC AGGCCACCCG GTTCGATGCG
GTTCGCCGCC TGCGCGCCCT TGCCAAGGAC ATCGGCCGCC TGCTGCCGGA GCAGCGCGCC
CGCGCCAACG ACCTTGCCGA GCGGCTCGTC GCAGCCCTCG CGTCGGTGCC GGAGCAGTAC
GGCCTGATCC ATGGGGATTT CTCGGCCGAC CAGATCCTGG TGGGCGCAGA GGACGCGATC
ACCATCATCG ACTGGGATCG CGCCGCGATG GGCGATCAGG GGTCCGATCT CGGCAGCGCG
CTGGCCCGGC TGGAGGTGCA GCGCCTGTGG CACGGCCTGC CCGAGGCGGC GGCGAAGACC
GCGACCGAGG CCCTGCTTGC CGGTTACGGG GATGTGCGGC CTCTGCCTGC GTCCTGGTCG
GCGCAGGAAA CCGCCCATCT CTTCCTGCTG TTGGGAGAAG CGTTTCGTCA TCAGCTGCCC
GATTGGCCCG CGCGGACCTG CGCACTGCTG GACCGGGTCG AAGCGGGCCT CCGCACCGCT
CCGGCGCCAC AGGTCGATCC GGAACTGCCC CAACTCGCAA CATTGCTCGA TCCGCAAGGG
GCAGCGCAGG CCCTTGCGGC GCATCAAAGC CCGACCGTGG TCGCGCCGCC CAAACTCCGG
CGCCACAAAC CCGGACGCCG TGCACTGATC GACGTGACCG CGCGGGACGC GGCAGGAGAT
GCGACCGACT ACCTTATCAA GACACGCGCC AAACGGGCCG ATCATGCCAC CCCGGCATAC
CATGCCGCGT TGCGTGCGGC CGGGTTCACC GAAACCGGGG CAGGGGCCTT TGCCGTGCCC
GAGGCATGGC CCGGCCCGCC GCGTCTGCGC GCCTGGAGCA TGCGGAAGGT GCCCGGTCGG
ACCCTCACCG CCTGCCTACA TCCCAAGGCC CCGGTGGCGC CGTTCCGGCA AGCCGGGCGG
GCGCTGGCCG CGTTGCATGC CTGCCATGTC GAGGGCGTGC CGCGCTGGAC GCCGGAGGCC
GAATGGGACG TGCTCGCGCG GGCGCTGGAC CATGCGGCGA ACGCGCATCC CGGCGATGCC
GAGGCGCTGG CGGGCCTGCG CCGGGCGGCG CGGATTGCCC TCGACCGGGT GCCGAAGCGC
CCGGATGTCC TGCTGCACCG CGACTTCTAT CCCGACCAGC TGCTCGTGGA GGAAAGCCGC
CTTTGGATGA TCGACCTCGA CCTTCTGGCG ATGGGGGACC GGCACGTGGA TGTGGGCAAT
TTCCTTGCCC ATCTTGATGA GCAGGGGCTG CGCGATCACG GCGCGGTGCA GGTCTTCGAC
GACCATGCCC GCGCGTTCCT CGCAGGGTAC CAGGAGGCGG GCACGCTCGA TATGGCCTCG
GTCCGCGTTT TGCGGGACGT GTCCCTGGCG CGCCATCTTC ACATCTGCGA CCGGATCGCC
AGCCGCAAAC CCTGCTATCC CAAGCTGCTC GCCGAGCTGT CCCGCTGGTT CGATCCCGGC
GGTGCCATGG GCCGCGCGCC GCACCCTGCC TGTGCGATGT CGGTGCCCCG ACCGGGGGCC
GCCGCCCGGA CCCGCGCAGG ATAA
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| Protein sequence | MPQNDALIAR DPGLPGLALL LDRSALEAGL GAPIAALGSL RYKPGTSCTR AVRLADGRHL
WLKALTRDRH GQVLARGQDL APQALRDRHV VAQSPAADRD IPGLKRLWPE QSRPAELARL
LGDHPLSRAV LHPLSHRPTR RLVARLDAGG TRAFLKAYTR KAHAQALSGI LLAATLGHGR
VLAACAERGL IVSDWIDGRS LCPANDAALD PHAFRQAGAA LATAHRAGLR TPFQATRFDA
VRRLRALAKD IGRLLPEQRA RANDLAERLV AALASVPEQY GLIHGDFSAD QILVGAEDAI
TIIDWDRAAM GDQGSDLGSA LARLEVQRLW HGLPEAAAKT ATEALLAGYG DVRPLPASWS
AQETAHLFLL LGEAFRHQLP DWPARTCALL DRVEAGLRTA PAPQVDPELP QLATLLDPQG
AAQALAAHQS PTVVAPPKLR RHKPGRRALI DVTARDAAGD ATDYLIKTRA KRADHATPAY
HAALRAAGFT ETGAGAFAVP EAWPGPPRLR AWSMRKVPGR TLTACLHPKA PVAPFRQAGR
ALAALHACHV EGVPRWTPEA EWDVLARALD HAANAHPGDA EALAGLRRAA RIALDRVPKR
PDVLLHRDFY PDQLLVEESR LWMIDLDLLA MGDRHVDVGN FLAHLDEQGL RDHGAVQVFD
DHARAFLAGY QEAGTLDMAS VRVLRDVSLA RHLHICDRIA SRKPCYPKLL AELSRWFDPG
GAMGRAPHPA CAMSVPRPGA AARTRAG
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