| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1989 |
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| Symbol | |
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| ID | 5712983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2103220 |
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| End bp | 2104452 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267912 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533329 |
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| Protein GI | 159044535 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.720347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAT TGATGCTGTG CTCGATGCTC ACGGTGCTGC CCGATTACCT CTACCGCAGC
CGGGTGCAGG GCAAGACCTG GGGGCAAGAG ATCACCTTCT TCACCATGTG GTACGAGCTG
CGCTGGGGCA TCACCCTGTG CGCGATGCTG ACCATCAGCC TGATCACCGT GGTGTTCTAT
TTCCACCCCA GCACGTCCAA CGTGACCTCC TTCTTCCGCA CGGTGACGAT CCTGTCCGAA
AGCGCGGGGC GCGTGGACAA GGTCTATGTG GATATCAACC AGGAGGTCGC CGCGGGCGAT
CCGATCTTCC GGCTCGACAG CTCCCGGCAG GAGGCCGCGG CCGAAACCGC CCGCCGCCAG
ATCGAGGAGG TCGATGCCGC ACTCCTGGTC GCGCAATCCG ATCTGGGCGG GGCCACCGGC
GCGCTGGAAC AGGCGCAAGC CGCCTACCGG CAGATCGAGC AGGATCTGAA CCGGCGCGAG
ACGTTGCTGG CCGAAGGCTC CTCCGCCGTC ACTCAGCGGG AGGTCGACAC CCTGCGCAAC
CAGCTCGACG AGGCGCAAGG CGCGCTCGAT GCCGCCGAGG CGAACCTGCG CTCGCTCCAG
ACCCGGATCG AGGTCGCCCT GCCCGCCCAA CGCGCCACGG CCAAGGCCGC GCTGGCCCAG
GCCGAGACCG AGATCGGGAA GATGACCGTC TATGCCGGGA TCGACGCCCG GATCGAGCAG
TTCGATTTGC GCGTGGGCGA TATCGTCAAC CCGATCCTGC GCCCCGCCGG TGTGCTCGTG
CCGCTGGATT CCGGGCGCAA CCGCTTCCAG GCGGGTTTCC CGCAGGTCGC AGCGCAAGTG
ATCCGCCCCG GCAGCGTGGC CGAGATCGCC TGCGTCTCGC AGCCCTTCTC GATCGTGCCC
ATGGTGGTGG TGCAGGTGCA GGACGTGATC GCCGCAGGCC AGATCCGGCC GTCGGACCAG
CTTCTGGATA TCGGTGCCCA GGGCGCGCCC GGCACGGTCA CGGTGTTCAT GGAGCCGCTC
TATCCCGGCA CCACCGACCT GATCCCGCCG GGCAGCCGCT GCCTTGCCAA TGCCTACACC
AACAACCACG AACGGCTGGA GACCGAGGAT CTGGGCATTT TCCACCGGAT CGGCCTGCAC
GTGGTCGACA CGGTGGGCGT GGTCCATGCG GCGGGGCTGC GCCTGCGCGC GCTGCTGATG
CCCTTCCAGC TGCTGGTCTT CACCGGTCAT TGA
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| Protein sequence | MLELMLCSML TVLPDYLYRS RVQGKTWGQE ITFFTMWYEL RWGITLCAML TISLITVVFY
FHPSTSNVTS FFRTVTILSE SAGRVDKVYV DINQEVAAGD PIFRLDSSRQ EAAAETARRQ
IEEVDAALLV AQSDLGGATG ALEQAQAAYR QIEQDLNRRE TLLAEGSSAV TQREVDTLRN
QLDEAQGALD AAEANLRSLQ TRIEVALPAQ RATAKAALAQ AETEIGKMTV YAGIDARIEQ
FDLRVGDIVN PILRPAGVLV PLDSGRNRFQ AGFPQVAAQV IRPGSVAEIA CVSQPFSIVP
MVVVQVQDVI AAGQIRPSDQ LLDIGAQGAP GTVTVFMEPL YPGTTDLIPP GSRCLANAYT
NNHERLETED LGIFHRIGLH VVDTVGVVHA AGLRLRALLM PFQLLVFTGH
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