| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1984 |
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| Symbol | |
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| ID | 5712978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2097130 |
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| End bp | 2097777 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641267907 |
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| Product | putative HTH-type transcriptional regulator |
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| Protein accession | YP_001533324 |
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| Protein GI | 159044530 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.235414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGCGC TCAACATTGC CCGGATCGAC CCGGTTTCCC TGCGTGACAC GGTGTATGCC
GAGCTGCGCG GGGCGTTCAC GCGCGGCGAG TTCGGCCCCG GCGACGCGGT CTCCCTGCGC
GGGCTGGCCG AGATGCTGGG CACCTCGATG ACCCCTGTGC GCGAGGCCGT GCGGCGGCTG
GTGGCCGAGG GCGCGCTGGA GGATATGCCG AACCGCAGTC TGCGCGTGCC CGACCTGCCA
GAGGCGCGCA TCCGGGAGCT GTGGCGCGCG CGGCTGTCGC TGGAAGGGCT GGCGCTGGAT
CTCGCCATGG ACCGGATGAC CGATGCGGCC CGGGCCGAGC TGTCGGCGAT CCTGACGCGC
GAGGGGCCGC AGCCGGACCT GCAGCAGAAT TACGACTTCC ACCTGACGCT TTACCGGCAG
AGCGAGAGCA CGGTGATCCT GCCGCTGATC GAGGCGCTCT GGCTGCAATA CGGCGCCTGT
TTGCATTTGG TGATGCAGCA CCCGGACGCC CGCGAGATCG CGCAGCATAC GCACCACCTG
GAATTGCTGG CGGCATTGGA GCGTGGCGAC CGGGCGGCAG CGCAGGCGGC GCTGGCCCGC
GATATCGGCC GCAGTTTCGG GGTCTTGCTG CCGGAGGGCG TGGCATGA
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| Protein sequence | MCALNIARID PVSLRDTVYA ELRGAFTRGE FGPGDAVSLR GLAEMLGTSM TPVREAVRRL
VAEGALEDMP NRSLRVPDLP EARIRELWRA RLSLEGLALD LAMDRMTDAA RAELSAILTR
EGPQPDLQQN YDFHLTLYRQ SESTVILPLI EALWLQYGAC LHLVMQHPDA REIAQHTHHL
ELLAALERGD RAAAQAALAR DIGRSFGVLL PEGVA
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