Gene Dshi_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1982 
Symbol 
ID5712976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2095569 
End bp2096651 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID641267905 
Productaldo/keto reductase family protein 
Protein accessionYP_001533322 
Protein GI159044528 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.454617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG AGACCGCGCA ACTGCGCCAC GATCACGAGA TCAGCCGCGT GATCAAGGGC 
GGCTGGCAGC TGGCCGGAGA TCACGGATCC GTGGACCGCG ACGCCGCCAT CCGCGATATG
GAGGCGTTTC TCGACGCCGG GATCACCACC TTCGACTGCG CCGACATCTA TGTGGGCGTC
GAAGAGATGA TCGGGGCCTT CATCGCCGAT CTGCGCCGCC GCCGCGGGGC CTCGGTGGCG
GACCGCGTCT GCGTGCATAC CAAGCTGGTC CCGGACCTCG GGCGGCTTGC GGACCTGCGC
CCCGAGGAGG TGGTGGCGAT CATCGACCGC TCGCTGATGC GCCTTCAAGT CGACCGGCTC
GACCTGGTGC AGTTCTTCTG GTGGGACCTG GGGCAGGGCG ACGCGGTCGC CGCTCTCTCG
GTGCTCAAGG ACGAGCAGGC CAAGGGCAAG ATCGGCAATC TCGGGGTGAC CAATTGGGAC
ATCGCCGAGA CCGCGCGCTT CACCGAGGCG GGCTTCGATC TGGTCTCGAC CCAGGTGCAG
TATTCCGTCC TCGACGCGCG TCCCGCGAAC GGGCTGGCGG ACTGGGCCAC GGGCCAAGAC
ATGCAGCTTC TGTGCTACGG CACCCTGGCG GGCGGGTTCC TGACCGAGCA CTGGCTCGGC
GCCCCGGACC CCGGCTTCGC CTTCGCGAAC CGCTCGCTCG TCAAGTATCG CCTGATCATC
GATGAATTCG GCCGATGGGA CCGCTTCCAG AGCCTGCTGC GCACTCTCAA GGCGATCGGC
GACAAGCACG GCGTGGGCCT CAGCGCCGTC GCCACGCGCC ATGTGCTCGA CCAGCCGGGG
GTCGCGGCGG CCATCGTCGG GGCGCGCTAT GCCCGCCACC TGCCGCGCAC GCTGGAGGTG
TTCGACCTGG CCCTCGATGC CGAGGACCGC GCGGCACTGG CGGCAATCCT GGCGCAAGCC
GACGGCCCGA CCGGCCCGGT CTACGGGTTG GAGCGGGACC GCACCAGCCG CCATGGCCGG
ATCATGAAAT ACAACCTCAA CACCAAACCC GACGACGCGG TGCTGGGCGC GGCCGATGGC
TGA
 
Protein sequence
MNPETAQLRH DHEISRVIKG GWQLAGDHGS VDRDAAIRDM EAFLDAGITT FDCADIYVGV 
EEMIGAFIAD LRRRRGASVA DRVCVHTKLV PDLGRLADLR PEEVVAIIDR SLMRLQVDRL
DLVQFFWWDL GQGDAVAALS VLKDEQAKGK IGNLGVTNWD IAETARFTEA GFDLVSTQVQ
YSVLDARPAN GLADWATGQD MQLLCYGTLA GGFLTEHWLG APDPGFAFAN RSLVKYRLII
DEFGRWDRFQ SLLRTLKAIG DKHGVGLSAV ATRHVLDQPG VAAAIVGARY ARHLPRTLEV
FDLALDAEDR AALAAILAQA DGPTGPVYGL ERDRTSRHGR IMKYNLNTKP DDAVLGAADG