| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1979 |
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| Symbol | |
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| ID | 5712973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2093174 |
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| End bp | 2094091 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267902 |
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| Product | putative branched-chain amino acid transport system / permease component |
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| Protein accession | YP_001533319 |
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| Protein GI | 159044525 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.571034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGC ACCTGCTCGA CGGCATCCTC GTGGGCGCGA TCCTGTCCCT GGGCGCGATC
GGGCTGACGC TCACCATGCA TATGCTGCGC TTTGCCAACT TCTCCCACGC GGAACTCCTC
AGCATCGGCG CCTATGCAGC ACTTGTGTTC GACGCGCTGT TCTCGGCCCT GCTGCCCGCT
CTGCAAACCG CGATCCCGCC CCTCAGCCTG ACCTGGACGC TCAGCCTTGC CACGGTTGCG
TCCATGGCCC TGACGGGCCT GTCGGCCATC GCCATCGACC GGCTGATCTT CAAACGCGTG
CGCGAGAAGG GGGGCGAGCT GTCCATGGTC TTTGCGTCCT TCGGGGTGGC CATGGTGATC
CGCAACCTGA TCGGGCTGGG CTTCGGGCTG AACACGCAAC TCTATTCCGA CGACATCGTT
TTCGCCACCG TGCTCAGTCG CGATCCGCTG ATCCTGGTGA AACCCGACCA GGTCTTCACC
CTTGTCGCCG CGCTGGCGAT CATGGTCGTG TTGCACCTCG TGCTGTCACG CACGACCTTC
GGCTACTCCC TGCGCGCGGT GGCCGAGAAC CCGGTGCTGG CGCAGGTGTC GGGCATAAAC
CTGCAACGCA TGGTGGCGCT GATCTGGATC CTCGGCGGCA CGCTCGCCGC GGCGGCGGGC
GTGTTCTACG GGCTGACCAA CCAGATCACG CCGGTGATCG GGCGCGACCT CGTGCTGCCG
ATCTTCGCGG CCACCATCGT CGGCGGCATC GGCAGCATTT ATGGCGCGGT CCTGGGCGGG
TTCCTGGTGG GGATCGCCGC GAACCTCGCA CTTGTGGTGC TGCCCTCGGG CTACAGCCCC
TCGGTGCCCT TCCTGATCCT TGTCGCGGTG CTGGTCCTGC GCCCCCATGG GCTTTTCGGC
GAGGCGCGCG CCACATGA
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| Protein sequence | MIQHLLDGIL VGAILSLGAI GLTLTMHMLR FANFSHAELL SIGAYAALVF DALFSALLPA
LQTAIPPLSL TWTLSLATVA SMALTGLSAI AIDRLIFKRV REKGGELSMV FASFGVAMVI
RNLIGLGFGL NTQLYSDDIV FATVLSRDPL ILVKPDQVFT LVAALAIMVV LHLVLSRTTF
GYSLRAVAEN PVLAQVSGIN LQRMVALIWI LGGTLAAAAG VFYGLTNQIT PVIGRDLVLP
IFAATIVGGI GSIYGAVLGG FLVGIAANLA LVVLPSGYSP SVPFLILVAV LVLRPHGLFG
EARAT
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